RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 FNDC8Q8TC99 324 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 PHOSPHO2Q8TCD6 241 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 LGALS14Q8TCE9 139 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TCP10LQ8TDR4 215 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TMEM239Q8WW34 195 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TADA1Q96BN2 335 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 SMIM10Q96HG1 83 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 OXGR1Q96P68 337 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 RNF2Q99496 336 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 ATP5SQ99766 215 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 CTRCQ99895 268 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 PSD2Q9BQI7 771 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 MED10Q9BTT4 135 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 LRRC1Q9BTT6 524 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 FAIM2Q9BWQ8 316 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 SHCBP1LQ9BZQ2 653 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 DEFB129Q9H1M3 183 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 IL25Q9H293 177 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 SLC38A1Q9H2H9 487 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 ADNPQ9H2P0 1102 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 VCX3BQ9H321 246 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 C1orf198Q9H425 327 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 NMUR1Q9HB89 426 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 DMAP1Q9NPF5 467 aaPredicted RBP2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TREX1Q9NSU2 369 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 NECAP2Q9NVZ3 263 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TEX10Q9NXF1 929 aaPredicted RBP2.85□□□□□ -1.95
PRPF4-203ENST00000488937 EMC3Q9P0I2 261 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 SENP1Q9P0U3 644 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 DCDC2Q9UHG0 476 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 CLEC2DQ9UHP7 191 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 ERVW-1Q9UQF0 538 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 FADS3Q9Y5Q0 445 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 SAR1BQ9Y6B6 198 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 RAD50Q92878 1312 aa2.85□□□□□ -1.95
PRPF4-203ENST00000488937 TDRD15B5MCY1 1934 aaKnown RBP2.85□□□□□ -1.95
PRPF4-203ENST00000488937 AQRO60306 1485 aaKnown RBP eCLIP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 GREB1LQ9C091 1923 aaPredicted RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 COL22A1Q8NFW1 1626 aaPredicted RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 IGLV5-39A0A0G2JS06 123 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TRBV7-9A0A0J9YWB2 115 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 A0A1B0GW15 77 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 FABP12A6NFH5 140 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 MSGN1A6NI15 193 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TMEM210A6NLX4 147 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 KLRC4-KLRK1H3BQV0 150 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TNFRSF13BO14836 293 aaPredicted RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 AIM2O14862 343 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 XRCC2O43543 280 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TRAPPC3O43617 180 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 SNAI2O43623 268 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 AP2A2O94973 939 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TSHBP01222 138 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ZNF12P17014 697 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 POLR2EP19388 210 aaKnown RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 COX5AP20674 150 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 GPR183P32249 361 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 FOXN2P32314 431 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 DDOSTP39656 456 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 SLC26A3P40879 764 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ID1P41134 155 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 AQP2P41181 271 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 CDC34P49427 236 aaPredicted RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 THBS3P49746 956 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 KPNA2P52292 529 aaKnown RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 CRISP1P54107 249 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 PRPS1P60891 318 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 RPS15AP62244 130 aaKnown RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 LTBQ06643 244 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ITGB3BPQ13352 177 aaPredicted RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 GCKRQ14397 625 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TMEM187Q14656 261 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 GNMTQ14749 295 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 RBMS2Q15434 407 aaKnown RBP2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TSC22D1Q15714 1073 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 GTDC1Q4AE62 458 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 SOHLH1Q5JUK2 328 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 LINC00242Q5T6M2 205 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ADAM5Q6NVV9 412 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 SPESP1Q6UW49 350 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ZNF836Q6ZNA1 936 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 PLEKHG7Q6ZR37 379 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 STOX1Q6ZVD7 989 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 DCXRQ7Z4W1 244 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ISCA2Q86U28 154 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 IFNEQ86WN2 208 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TMEM199Q8N511 208 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 IQCF1Q8N6M8 205 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 OR4C3Q8NH37 302 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 CA5BP1Q8WTZ4 195 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 CAPSLQ8WWF8 208 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 DYRK2Q92630 601 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 SMARCD2Q92925 531 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 ISOC2Q96AB3 205 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 RPEQ96AT9 228 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 CCDC127Q96BQ5 260 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 DNAJA3Q96EY1 480 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 TNFRSF13CQ96RJ3 184 aa2.84□□□□□ -1.95
PRPF4-203ENST00000488937 NAPGQ99747 312 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms