RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PRAMEF8Q5VWM4 474 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 PRAMEF7Q5VXH5 474 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 TMEM225Q6GV28 225 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 PAIP2Q9BPZ3 127 aaKnown RBP16.05■□□□□ 0.16
HDAC6-231ENST00000488905 KATNB1Q9BVA0 655 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 WDR55Q9H6Y2 383 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-231ENST00000488905 CA10Q9NS85 328 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-231ENST00000488905 V9GYY5 206 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-231ENST00000488905 OR6C65A6NJZ3 312 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 TRPC5OSA6NMA1 111 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 HDAC3O15379 428 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 LMX1BO60663 402 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 NPIPB7O75200 414 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 IL6P05231 212 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 PRG2P13727 222 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 NCF2P19878 526 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-231ENST00000488905 IGFBP5P24593 272 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 CRATP43155 626 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 NR4A2P43354 598 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 DSTNP60981 165 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 UBE2NP61088 152 aaKnown RBP16.04■□□□□ 0.16
HDAC6-231ENST00000488905 LARS2Q15031 903 aaKnown RBP16.04■□□□□ 0.16
HDAC6-231ENST00000488905 RPS26P11Q5JNZ5 115 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-231ENST00000488905 NIPAL3Q6P499 406 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 CREB3L2Q70SY1 520 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 SLC46A3Q7Z3Q1 461 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 SLC38A5Q8WUX1 472 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 C3orf49Q96BT1 292 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 ZNF317Q96PQ6 595 aaPredicted RBP16.04■□□□□ 0.16
HDAC6-231ENST00000488905 RASD1Q9Y272 281 aa16.04■□□□□ 0.16
HDAC6-231ENST00000488905 ARPC4-TTLL3A0A0A6YYG9 625 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 PDE5AO76074 875 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 ANP32DO95626 131 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 CRYAAP02489 173 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 TFPTP0C1Z6 253 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 IDO1P14902 403 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 PAX7P23759 505 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 SERPINF1P36955 418 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 ZSWIM7Q19AV6 140 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 PDCD4Q53EL6 469 aaKnown RBP16.03■□□□□ 0.16
HDAC6-231ENST00000488905 CEP85LQ5SZL2 805 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 HHATQ5VTY9 493 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 FAM166AQ6J272 317 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 SERPINA11Q86U17 422 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 EPHX4Q8IUS5 362 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 CLIP4Q8N3C7 705 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 ARIH2OSQ8N7S6 290 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 ANKS4BQ8N8V4 417 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 ANKRD42Q8N9B4 389 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 BCL2L2Q92843 193 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-231ENST00000488905 TMEM19Q96HH6 336 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 NELFAQ9H3P2 528 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 TPT1P8Q9HAU6 139 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 MYOZ1Q9NP98 299 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-231ENST00000488905 CRNNQ9UBG3 495 aaPredicted RBP16.03■□□□□ 0.16
HDAC6-231ENST00000488905 KCNS2Q9ULS6 477 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 CHST2Q9Y4C5 530 aa16.03■□□□□ 0.16
HDAC6-231ENST00000488905 SNNO75324 88 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 UPK3AO75631 287 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 SLC22A3O75751 556 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 AHSA1O95433 338 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 CECR9P0C854 216 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 KITP10721 976 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 SH3BGRP55822 239 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 TUBA1BP68363 451 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 TUBA4AP68366 448 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 NAAAQ02083 359 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 ADIPOQQ15848 244 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 CARTPTQ16568 116 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 C3orf36Q3SXR2 165 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 GTDC1Q4AE62 458 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 NXNQ6DKJ4 435 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 TUBA1AQ71U36 451 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 MAGEE2Q8TD90 523 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 STK35Q8TDR2 534 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 ZBTB9Q96C00 473 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 VRK1Q99986 396 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 PRR14Q9BWN1 585 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 LINC00470Q9BZP3 86 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 ARMC7Q9H6L4 198 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 CHODLQ9H9P2 273 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 CACYBPQ9HB71 228 aaKnown RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 MOV10Q9HCE1 1003 aaKnown RBP16.02■□□□□ 0.16
HDAC6-231ENST00000488905 THAP1Q9NVV9 213 aa16.02■□□□□ 0.16
HDAC6-231ENST00000488905 NBEAL1Q6ZS30 2694 aa16.02■□□□□ 0.15
HDAC6-231ENST00000488905 A0A096LPE4 126 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 IGHV4-61A0A0C4DH41 118 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 A0A1W2PPZ6 126 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 TMEM247A6NEH6 219 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 B9A039 149 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 FTCDNL1E5RQL4 147 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 NR5A2O00482 541 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 IGLV1-44P01699 117 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 PNMTP11086 282 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 APEHP13798 732 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms