RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ADPRHL2Q9NX46 363 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 IGKV3-15P01624 115 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 BPGMP07738 259 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 ERCC1P07992 297 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 IGFBP1P08833 259 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 CELA3BP08861 270 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 IL7RP16871 459 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 CFPP27918 469 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 THBS4P35443 961 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 BNIP2Q12982 314 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 GNA13Q14344 377 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 TRIP10Q15642 601 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 GSTA3Q16772 222 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 LRRC74BQ6ZQY2 392 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 MYPOPQ86VE0 399 aaPredicted RBP16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 EPHX4Q8IUS5 362 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 FAM169BQ8N8A8 192 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 TAPBPLQ9BX59 468 aa16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 MOV10Q9HCE1 1003 aaKnown RBP16.84■□□□□ 0.29
SMPDL3A-202ENST00000487215 TMEM129A0AVI4 362 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 OR6C65A6NJZ3 312 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 FRS3O43559 492 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 VAMP5O95183 116 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 NPR2P20594 1047 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 RIN1Q13671 783 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 RINLQ6ZS11 566 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 SPATA21Q7Z572 469 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 CCDC115Q96NT0 180 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 LINC00470Q9BZP3 86 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 MTHFD2LQ9H903 347 aaPredicted RBP16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 RLIMQ9NVW2 624 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 PCDHB14Q9Y5E9 798 aa16.83■□□□□ 0.28
SMPDL3A-202ENST00000487215 A8MVM7 634 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 ITM2AO43736 263 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 VENTXO95231 258 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 DBIP07108 87 aaKnown RBP16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 GKN3PP0CG01 181 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 IFNGR1P15260 489 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 DVL1P1P54792 670 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 SH3BGRP55822 239 aaPredicted RBP16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 ROR2Q01974 943 aaKnown RBP16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 CCNIQ14094 377 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 ADRM1Q16186 407 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 DPY19L1Q2PZI1 675 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 FAM174BQ3ZCQ3 159 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 PRAMEF8Q5VWM4 474 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 PRAMEF7Q5VXH5 474 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 NUDCD3Q8IVD9 361 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF440Q8IYI8 595 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 CDK20Q8IZL9 346 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 CADM2Q8N3J6 435 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF781Q8N8C0 355 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 UBASH3BQ8TF42 649 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 DYNLRB1Q9NP97 96 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 BTNL2Q9UIR0 455 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 METRNQ9UJH8 293 aa16.82■□□□□ 0.28
SMPDL3A-202ENST00000487215 IGHV2OR16-5A0A0B4J2B6 119 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 SH3PXD2BA1X283 911 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 CDHR4A6H8M9 788 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 VSTM5A8MXK1 200 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 E9PBE3 544 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 LYNX1G3V0Z9 82 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 LYNX1P0DP58 116 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 HOXB1P14653 301 aaPredicted RBP16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 CBR1P16152 277 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 CREB1P16220 341 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 ACAA2P42765 397 aaKnown RBP16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 CLNS1AP54105 237 aaKnown RBP16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 C1orf140Q5VVS0 124 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 SEMA6DQ8NFY4 1073 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 CKAP2Q8WWK9 683 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 ANKRD27Q96NW4 1050 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 OCEL1Q9H607 264 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 RASD1Q9Y272 281 aa16.81■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF503-AS2A6NEH8 195 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 CCDC154A6NI56 674 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 TMEM229AB2RXF0 380 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 SPRY1O43609 319 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 NPIPB7O75200 414 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 NR2F1P10589 423 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 PCMT1P22061 227 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 S100A3P33764 101 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 CDKN2CP42773 168 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 ETV4P43268 484 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 ANXA11P50995 505 aaKnown RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 VSNL1P62760 191 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 TXNL4AP83876 142 aaKnown RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 ARF1P84077 181 aaKnown RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 MAPK11Q15759 364 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 COX20Q5RI15 118 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 WBP2NLQ6ICG8 309 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 UGT2A3Q6UWM9 527 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF836Q6ZNA1 936 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 VRK2Q86Y07 508 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 PNPT1Q8TCS8 783 aaKnown RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 PANX1Q96RD7 426 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 TMEM109Q9BVC6 243 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 359.1 ms