RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ELOA3DA6NLF2 546 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 FTCDNL1E5RQL4 147 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 SMAD7O15105 426 aaKnown RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 FZD7O75084 574 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 CD8AP01732 235 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 H2AFXP16104 143 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 SLC6A2P23975 617 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 EGR4Q05215 589 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 ELOA3BQ3SY89 546 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 C9orf135Q5VTT2 229 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 C5orf46Q6UWT4 87 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 DEPDC4Q8N2C3 294 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 BHLHE22Q8NFJ8 381 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 ELOA3Q8NG57 546 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 DNAJA4Q8WW22 397 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 ZNF607Q96SK3 696 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 PTDSS2Q9BVG9 487 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 ALG2Q9H553 416 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 IKZF5Q9H5V7 419 aa16.75■□□□□ 0.27
CLIP2-206ENST00000487091 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 LEF1Q9UJU2 399 aaPredicted RBP16.75■□□□□ 0.27
CLIP2-206ENST00000487091 A0A1W2PR80 420 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 PRORSD1PA6NEY8 169 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 OR2T1O43869 369 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 PNMTP11086 282 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 CDKN1AP38936 164 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 PRPS1P60891 318 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 SCARB2Q14108 478 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 ADRM1Q16186 407 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 CLEC12BQ2HXU8 276 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 RUNDC3AQ59EK9 446 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 AGAP6Q5VW22 663 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 EPHX4Q8IUS5 362 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 TSPEARQ8WU66 669 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 CPPED1Q9BRF8 314 aaPredicted RBP16.74■□□□□ 0.27
CLIP2-206ENST00000487091 EVA1AQ9H8M9 152 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 TRIM33Q9UPN9 1127 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 ZANQ9Y493 2812 aa16.74■□□□□ 0.27
CLIP2-206ENST00000487091 FN1P02751 2386 aaKnown RBP16.73■□□□□ 0.27
CLIP2-206ENST00000487091 A0A1B0GWA3 101 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 E7EQL1 145 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 M0R1B8 84 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 TPST1O60507 370 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 SERPINB7O75635 380 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 HTR2AP28223 471 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 RPS5P46782 204 aaKnown RBP16.73■□□□□ 0.27
CLIP2-206ENST00000487091 TNK1Q13470 666 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 FAM91A1Q658Y4 838 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 SLC22A25Q6T423 547 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 NET1Q7Z628 596 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-206ENST00000487091 COMTD1Q86VU5 262 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 DPP10Q8N608 796 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 HIPK4Q8NE63 616 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 SLC25A36Q96CQ1 311 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 KTI12Q96EK9 354 aaPredicted RBP16.73■□□□□ 0.27
CLIP2-206ENST00000487091 DHRS9Q9BPW9 319 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 SIKE1Q9BRV8 207 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 ZNF385DQ9H6B1 395 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 OBP2BQ9NPH6 170 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 TESQ9UGI8 421 aaKnown RBP16.73■□□□□ 0.27
CLIP2-206ENST00000487091 POU2F3Q9UKI9 436 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 NDUFAF1Q9Y375 327 aa16.73■□□□□ 0.27
CLIP2-206ENST00000487091 HIVEP2P31629 2446 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 EDF1O60869 148 aaKnown RBP16.72■□□□□ 0.27
CLIP2-206ENST00000487091 KRT33AO76009 404 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 WNT11O96014 354 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 PAX7P23759 505 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 GTF2E2P29084 291 aaKnown RBP16.72■□□□□ 0.27
CLIP2-206ENST00000487091 TTKP33981 857 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 SELENOPP49908 381 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 GLIPR1L2Q4G1C9 344 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ALG10BQ5I7T1 473 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 FAM69AQ5T7M9 428 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 METTL21CQ5VZV1 264 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ULK3Q6PHR2 472 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 SLC38A4Q969I6 547 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 SLC47A1Q96FL8 570 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 THOC1Q96FV9 657 aaKnown RBP16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ANKRD27Q96NW4 1050 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 C1QTNF6Q9BXI9 259 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 BARX1Q9HBU1 254 aaPredicted RBP16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ANGPT4Q9Y264 503 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 B3GALT5Q9Y2C3 310 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ALPK2Q86TB3 2170 aa16.72■□□□□ 0.27
CLIP2-206ENST00000487091 ZNF587BE7ETH6 402 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 IGHV4-39P01824 125 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 ZNF43P17038 809 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 SLC25A3Q00325 362 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 SPOCK1Q08629 439 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 RBBP4Q09028 425 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 VEZF1Q14119 521 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 NIPAL3Q6P499 406 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 KLHL24Q6TFL4 600 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 DHDDSQ86SQ9 333 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 ARMC8Q8IUR7 673 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 FBXL14Q8N1E6 418 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 C11orf65Q8NCR3 313 aa16.71■□□□□ 0.27
CLIP2-206ENST00000487091 OR6S1Q8NH40 331 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms