RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 IGHV3-20A0A0C4DH32 117 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 A0A0J9YVX5 310 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF724A8MTY0 619 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 WASH3PC4AMC7 463 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 H0YL77 283 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 EI24O14681 340 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RIPK2O43353 540 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 MBTPS2O43462 519 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF821O75541 412 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 SPAG6O75602 509 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 MFN2O95140 757 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 NXPH4O95158 308 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 DUS4LO95620 317 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 GOT2P00505 430 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 AGTP01019 485 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ADORA3P0DMS8 318 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CLUP10909 449 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 POLR2EP19388 210 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ELK3P41970 407 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RGRP47804 291 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CRYBA2P53672 197 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 GPX6P59796 221 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RHOAP61586 193 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 PPIAP62937 165 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CDH17Q12864 832 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF235Q14590 738 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TMEM187Q14656 261 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 UNC50Q53HI1 259 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF311Q5JNZ3 666 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ATAD3BQ5T9A4 648 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 WASH2PQ6VEQ5 465 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 C3orf62Q6ZUJ4 267 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 LHFPL4Q7Z7J7 247 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CROCCP2Q86T23 111 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RANBP3LQ86VV4 465 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZDHHC21Q8IVQ6 265 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CCDC36Q8IYA8 594 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 DNAAF3Q8N9W5 541 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 FBXO36Q8NEA4 188 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 OR52K1Q8NGK4 314 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 OR4F5Q8NH21 305 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 N4BP2L2Q92802 583 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ISG20Q96AZ6 181 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 VSTM2LQ96N03 204 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CDX2Q99626 313 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TBL1YQ9BQ87 522 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CCDC77Q9BR77 488 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RPP25Q9BUL9 199 aaKnown RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TMEM109Q9BVC6 243 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 GSDMCQ9BYG8 508 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 PLA2G2FQ9BZM2 168 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ROPN1BQ9BZX4 212 aaPredicted RBP3.36□□□□□ -1.87
PTCD3-216ENST00000487043 IL22Q9GZX6 179 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 POMKQ9H5K3 350 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 NT5DC2Q9H857 520 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 CALHM2Q9HA72 323 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 FGF22Q9HCT0 170 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TRPV5Q9NQA5 729 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 STARD5Q9NSY2 213 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 C1orf123Q9NWV4 160 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 TMEM181Q9P2C4 612 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 DEC1Q9P2X7 70 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 GGA2Q9UJY4 613 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RABL2BQ9UNT1 228 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 ERVW-1Q9UQF0 538 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 HS3ST2Q9Y278 367 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 RNF115Q9Y4L5 304 aa3.36□□□□□ -1.87
PTCD3-216ENST00000487043 DOCK8Q8NF50 2099 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 A0A087X002 238 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TCRBV9S1A1TA0A576 114 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 IGLON5A6NGN9 336 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 TRIM64CA6NLI5 447 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 H3BTX0 84 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 K7ERQ8 282 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 BANF1O75531 89 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 POP4O95707 220 aaKnown RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 IGSF6O95976 241 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 CSF2P04141 144 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 SHBGP04278 402 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 FGF1P05230 155 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 SLC35G4P0C7Q5 338 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RPA2P15927 270 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ZNF26P17031 533 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 PGAM1P18669 254 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 PAX7P23759 505 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 GDI1P31150 447 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 PHBP35232 272 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 OPRD1P41143 372 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 GBX2P52951 348 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 ACTR1AP61163 376 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RPL26P61254 145 aaKnown RBP3.35□□□□□ -1.87
PTCD3-216ENST00000487043 AP1S1P61966 158 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 RAD51Q06609 339 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 BCL2L1Q07817 233 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 IFFO1Q0D2I5 559 aa3.35□□□□□ -1.87
PTCD3-216ENST00000487043 HTR4Q13639 388 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms