RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 WNT9BO14905 357 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CFLARO15519 480 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 AKR7A3O95154 331 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CHEK2O96017 543 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 KNG1P01042 644 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CELA3BP08861 270 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 SNRPAP09012 282 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 IMPDH2P12268 514 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 TCN1P20061 433 aaPredicted RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 EFNA1P20827 205 aaPredicted RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 MATN1P21941 496 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 NR4A1P22736 598 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 LSP1P33241 339 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 GLRXP35754 106 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 RAD52P43351 418 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 IDH2P48735 452 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 SELENOPP49908 381 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 GNG11P61952 73 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 ROR2Q01974 943 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 C2orf54Q08AI8 447 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 OR7A5Q15622 319 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 TRMT5Q32P41 509 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 ARHGAP11BQ3KRB8 267 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CFAP157Q5JU67 520 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 EMBQ6PCB8 327 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 ZDHHC24Q6UX98 284 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 MYPOPQ86VE0 399 aaPredicted RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 SPATA4Q8NEY3 305 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 SNX33Q8WV41 574 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 RAB8BQ92930 207 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 YIPF5Q969M3 257 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 TIMD4Q96H15 378 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 SLC35G5Q96KT7 338 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 DUX5Q96PT3 197 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CCT8L2Q96SF2 557 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 PRPF18Q99633 342 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 SYT3Q9BQG1 590 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 FUT8Q9BYC5 575 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 ZNF350Q9GZX5 532 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 NELFAQ9H3P2 528 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 SERHL2Q9H4I8 314 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 POLE3Q9NRF9 147 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 NINJ2Q9NZG7 142 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 TESQ9UGI8 421 aaKnown RBP6.56□□□□□ -1.36
PDPN-205ENST00000487038 ATP6V1HQ9UI12 483 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 ZDHHC2Q9UIJ5 367 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 NUP50Q9UKX7 468 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 WDR45Q9Y484 360 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 KCNE3Q9Y6H6 103 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 NUP214P35658 2090 aaPredicted RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 TMEM72A0PK05 275 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 CLDN34H7C241 214 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 AKAP8O43823 692 aaKnown RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 SCN2BO60939 215 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 RP2O75695 350 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ZNF432O94892 652 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 C6orf47O95873 294 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 FSHBP01225 129 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 IGHV2-5P01817 119 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 MYL2P10916 166 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 BCKDHAP12694 445 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 MDKP21741 143 aaPredicted RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 CXCR1P25024 350 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GTF2E2P29084 291 aaKnown RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 ALDH3B1P43353 468 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ATP4BP51164 291 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 SELENOVP59797 346 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 MVKQ03426 396 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 CEACAM7Q14002 265 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GSG1Q2KHT4 349 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 PCGF3Q3KNV8 242 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GALNTL6Q49A17 601 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GLIPR1L2Q4G1C9 344 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 FBLN7Q53RD9 439 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 AVPI1Q5T686 147 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ATAD3BQ5T9A4 648 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 PRAMEF8Q5VWM4 474 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 PRAMEF7Q5VXH5 474 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 LIPMQ5VYY2 423 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 TMEM154Q6P9G4 183 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 FRMD7Q6ZUT3 714 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 CREB3L2Q70SY1 520 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 MDP1Q86V88 176 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 CNPY4Q8N129 248 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GPR137CQ8N3F9 429 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 TMEM99Q8N816 258 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ZIC4Q8N9L1 334 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 OR5AK3PQ8NH89 298 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ST7LQ8TDW4 575 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 DVL3Q92997 716 aaPredicted RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 LRRC58Q96CX6 371 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 GAL3ST1Q99999 423 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 TSPYL1Q9H0U9 437 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.55□□□□□ -1.36
PDPN-205ENST00000487038 ADPRHL2Q9NX46 363 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 PLEK2Q9NYT0 353 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 SLC7A8Q9UHI5 535 aa6.55□□□□□ -1.36
PDPN-205ENST00000487038 BAIAP2L1Q9UHR4 511 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms