RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 AIF1LQ9BQI0 150 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 EXO5Q9H790 373 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 ZNF334Q9HCZ1 680 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-208ENST00000486641 STARD7Q9NQZ5 370 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MTFP1Q9UDX5 166 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 MIOXQ9UGB7 285 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 HS3ST2Q9Y278 367 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 NUMA1Q14980 2115 aa9.78□□□□□ -0.84
CCDC171-208ENST00000486641 A0A087WV48 116 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 A0A0A6YYD5 115 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TRAPPC13A5PLN9 417 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MEIS3P1A6NDR6 274 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 IDSB3KWA1 339 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SMAD9O15198 467 aaKnown RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 RAD1O60671 282 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR2F2O95006 317 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 RCBTB2O95199 551 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 PPP1R3DO95685 299 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 STATHP02808 62 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 CALCBP10092 127 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 PSMB5P28074 263 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MNDAP41218 407 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 NAA10P41227 235 aaPredicted RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF136P52737 540 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ARFIP1P53367 373 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ST8SIA6P61647 398 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR2F1Q13607 317 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TAF13Q15543 124 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MAMSTRQ6ZN01 415 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF793Q6ZN11 406 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 FAM122BQ7Z309 247 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TRAPPC5Q8IUR0 188 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 DND1Q8IYX4 353 aaKnown RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SYS1Q8N2H4 156 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SDR9C7Q8NEX9 313 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 NUP43Q8NFH3 380 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR5AR1Q8NGP9 310 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 PHOSPHO1Q8TCT1 267 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM239Q8WW34 195 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ASB13Q8WXK3 278 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ING5Q8WYH8 240 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OTUB2Q96DC9 234 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SLC35A4Q96G79 324 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZDHHC5Q9C0B5 715 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 RSPH9Q9H1X1 276 aaPredicted RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR51M1Q9H341 326 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 POFUT1Q9H488 388 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 C2orf42Q9NWW7 574 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 PCOLCE2Q9UKZ9 415 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SIGLEC7Q9Y286 467 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF443Q9Y2A4 671 aaPredicted RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TCF20Q9UGU0 1960 aaKnown RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 LRIT2A6NDA9 550 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 C5orf52A6NGY3 159 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 EFCAB7A8K855 629 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR1F1O43749 312 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR2T1O43869 369 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 LILRB5O75023 590 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ICOSLGO75144 302 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 PAPLNO95428 1278 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 CD8AP01732 235 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 S100A8P05109 93 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 RPLP2P05387 115 aaKnown RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TIMP2P16035 220 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF3P17036 446 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 HTR2AP28223 471 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 CSF2RBP32927 897 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MC3RP41968 323 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF345Q14585 488 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 POM121L1PQ3SYA9 428 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 LRRC37A5PQ49AS3 106 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 SLC8B1Q6J4K2 584 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 C3orf33Q6P1S2 294 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZCCHC12Q6PEW1 402 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF813Q6ZN06 617 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 ZNF836Q6ZNA1 936 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 CMTM8Q8IZV2 173 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 STEAP2Q8NFT2 490 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR56A1Q8NGH5 318 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 AICDAQ9GZX7 198 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 OR2AG1Q9H205 316 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM231Q9H6L2 316 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MBD2Q9UBB5 411 aa9.77□□□□□ -0.85
CCDC171-208ENST00000486641 MDC1Q14676 2089 aaKnown RBP9.77□□□□□ -0.85
CCDC171-208ENST00000486641 CENPVL1A0A0U1RR11 272 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 TMEM82A0PJX8 343 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 COLCA2A8K830 154 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PSMD9O00233 223 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 EMC8O43402 210 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OLFM2O95897 454 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 IGHV2-70P01814 119 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CD1AP06126 327 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms