RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RPS5P46782 204 aaKnown RBP16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 C1QTNF12Q5T7M4 302 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 C9orf135Q5VTT2 229 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 FAM91A1Q658Y4 838 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 ULK3Q6PHR2 472 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 KLHL17Q6TDP4 642 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 C5orf46Q6UWT4 87 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 PTOV1Q86YD1 416 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 ARMC8Q8IUR7 673 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 EPHX4Q8IUS5 362 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 C17orf78Q8N4C9 275 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 C11orf65Q8NCR3 313 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 SMR3AQ99954 134 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 PRR14Q9BWN1 585 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 EVA1AQ9H8M9 152 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 TMEM27Q9HBJ8 222 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC17A5Q9NRA2 495 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC13A4Q9UKG4 626 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 MGAT4BQ9UQ53 548 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 ANGPT4Q9Y264 503 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 DSCAMO60469 2012 aa16.17■□□□□ 0.18
PRPF40A-209ENST00000486100 FZD7O75084 574 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 ZNF83P51522 516 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 ATP5J2P56134 94 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 DMTNQ08495 405 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 NFYCQ13952 458 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 SELPLGQ14242 412 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 PGGHGQ32M88 737 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 ALG10BQ5I7T1 473 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 ABHD12BQ7Z5M8 362 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 NET1Q7Z628 596 aaPredicted RBP16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC38A4Q969I6 547 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 TAAR8Q969N4 342 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 SLC47A1Q96FL8 570 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 TRMT61AQ96FX7 289 aaKnown RBP16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 BOD1Q96IK1 185 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 TESQ9UGI8 421 aaKnown RBP16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 AMDHD2Q9Y303 409 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 C2CD3Q4AC94 2353 aa16.16■□□□□ 0.18
PRPF40A-209ENST00000486100 OR6C65A6NJZ3 312 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 FAM171A2A8MVW0 826 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 H7C1Q1 480 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 M0QX08 132 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 KRT33AO76009 404 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 CD40P25942 277 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 GTF2E2P29084 291 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 SELENOPP49908 381 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 PCBP3P57721 371 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 RGS8P57771 180 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 MTPNP58546 118 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 NCALDP61601 193 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 OR1Q1Q15612 314 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 CYP51A1Q16850 503 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 FAM69AQ5T7M9 428 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 PIAS4Q8N2W9 510 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 CIARTQ8N365 385 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 KDM8Q8N371 416 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 COX4I2Q96KJ9 171 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 WFDC6Q9BQY6 131 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 C1QTNF6Q9BXI9 259 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 TMEM120AQ9BXJ8 343 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 GRIP2Q9C0E4 1043 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 SELENONQ9NZV5 590 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 MAGED1Q9Y5V3 778 aaPredicted RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 ARID1AO14497 2285 aa16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 FLNAP21333 2647 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-209ENST00000486100 IGKV1D-42A0A075B6H8 117 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 TRAV36DV7A0A075B6V5 113 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 A0A087WUJ7 227 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 A0A0B4J2E0 115 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 A0A1B0GX12 115 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 TRIM64A6NGJ6 449 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 TRIM64BA6NI03 449 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 M0R1B8 84 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 TPST2O60704 377 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 CD8AP01732 235 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 TROVE2P10155 538 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 ZNF43P17038 809 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 CDH11P55287 796 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 PRPS1P60891 318 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 NIPAL3Q6P499 406 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 SLC30A8Q8IWU4 369 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 DEPDC4Q8N2C3 294 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 SMYD1Q8NB12 490 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 OR6S1Q8NH40 331 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 GTPBP3Q969Y2 492 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 OXGR1Q96P68 337 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 MRGBPQ9NV56 204 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 FAIMQ9NVQ4 179 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 B3GALT5Q9Y2C3 310 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 NF1P21359 2839 aa16.14■□□□□ 0.17
PRPF40A-209ENST00000486100 FBP2O00757 339 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 AIM2O14862 343 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 LGI1O95970 557 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 WNT11O96014 354 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 C8BP07358 591 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 CDH2P19022 906 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 GRPRP30550 384 aa16.13■□□□□ 0.17
PRPF40A-209ENST00000486100 ARFIP2P53365 341 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms