RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 P2RY8Q86VZ1 359 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 SNX32Q86XE0 403 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 CALHM3Q86XJ0 350 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 KRTAP1-3Q8IUG1 177 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 P3H2Q8IVL5 708 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 SLC30A8Q8IWU4 369 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 LILRB1Q8NHL6 650 aaPredicted RBP17.21■□□□□ 0.35
SNX5-213ENST00000486039 SLC38A4Q969I6 547 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 PIGTQ969N2 578 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 TAAR8Q969N4 342 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 CCL19Q99731 98 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 EVA1AQ9H8M9 152 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 TMEM27Q9HBJ8 222 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 NGBQ9NPG2 151 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 SEC14L4Q9UDX3 406 aa17.21■□□□□ 0.35
SNX5-213ENST00000486039 NIPBLQ6KC79 2804 aaeCLIP17.2■□□□□ 0.34
SNX5-213ENST00000486039 A0A087WUJ7 227 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 CIB4A0PJX0 185 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 CCT8L1PA6NM43 557 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 BBIP1A8MTZ0 92 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 ATP8B1O43520 1251 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 C8BP07358 591 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 CD247P20963 164 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 CRYBA2P53672 197 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 MAPRE2Q15555 327 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 NPTX1Q15818 432 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 GABRA6Q16445 453 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 NRF1Q16656 503 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 C9orf135Q5VTT2 229 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 CREB3L2Q70SY1 520 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 PATL1Q86TB9 770 aaKnown RBP17.2■□□□□ 0.34
SNX5-213ENST00000486039 EPHX4Q8IUS5 362 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 KDM8Q8N371 416 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 OR8J3Q8NGG0 315 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 OR4D11Q8NGI4 311 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 IGFBPL1Q8WX77 278 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 AKAP1Q92667 903 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX5-213ENST00000486039 TAMM41Q96BW9 452 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 SLC47A1Q96FL8 570 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 MUS81Q96NY9 551 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 ESRP2Q9H6T0 727 aaKnown RBP17.2■□□□□ 0.34
SNX5-213ENST00000486039 NPAP1Q9NZP6 1156 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 UPB1Q9UBR1 384 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 RASD1Q9Y272 281 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 RNF115Q9Y4L5 304 aa17.2■□□□□ 0.34
SNX5-213ENST00000486039 FLNAP21333 2647 aaKnown RBP17.2■□□□□ 0.34
SNX5-213ENST00000486039 HS3ST1O14792 307 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 NPPAP01160 153 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 CD3EP07766 207 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 CDH12P55289 794 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 NKX6-1P78426 367 aaPredicted RBP17.19■□□□□ 0.34
SNX5-213ENST00000486039 BSPH1Q075Z2 132 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 FAM69AQ5T7M9 428 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 ADAM5Q6NVV9 412 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 C5orf46Q6UWT4 87 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 CCDC80Q76M96 950 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 BIVMQ86UB2 503 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 RANBP3LQ86VV4 465 aaPredicted RBP17.19■□□□□ 0.34
SNX5-213ENST00000486039 RBM45Q8IUH3 476 aaKnown RBP17.19■□□□□ 0.34
SNX5-213ENST00000486039 OR6T1Q8NGN1 323 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 MUCL1Q96DR8 90 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 MCHR1Q99705 422 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 SH3GL1Q99961 368 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 AMBRA1Q9C0C7 1298 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 USP22Q9UPT9 525 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 SLC25A15Q9Y619 301 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 CAPN7Q9Y6W3 813 aa17.19■□□□□ 0.34
SNX5-213ENST00000486039 TRAV36DV7A0A075B6V5 113 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 A0A1W2PR80 420 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 M0R082 166 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 CLOCKO15516 846 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 OR2T1O43869 369 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 FMO6PO60774 539 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 SMPD2O60906 423 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 SELENOPP49908 381 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 LTBQ06643 244 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 INTS11Q5TA45 600 aaKnown RBP17.18■□□□□ 0.34
SNX5-213ENST00000486039 SHEQ5VZ18 495 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 LRRC75A-AS1Q8N1F1 130 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 ZNF611Q8N823 705 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 OR52N5Q8NH56 324 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 ZNF417Q8TAU3 575 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 RNF217Q8TC41 542 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 NEUROG1Q92886 237 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 C18orf12Q96KH6 178 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 ZNF583Q96ND8 569 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 ZNF587Q96SQ5 575 aaPredicted RBP17.18■□□□□ 0.34
SNX5-213ENST00000486039 ECSITQ9BQ95 431 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 SLCO5A1Q9H2Y9 848 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 SELENONQ9NZV5 590 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 B3GAT1Q9P2W7 334 aa17.18■□□□□ 0.34
SNX5-213ENST00000486039 SLC22A2O15244 555 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 THY1P04216 161 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 PTNP21246 168 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 CBLP22681 906 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 GTF2E2P29084 291 aaKnown RBP17.17■□□□□ 0.34
SNX5-213ENST00000486039 MPGP29372 298 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 GRPRP30550 384 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 LGALS3BPQ08380 585 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms