RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.78■■□□□ 1.4
SHOX2-204ENST00000483851 ZNF41P51814 821 aaPredicted RBP23.78■■□□□ 1.4
SHOX2-204ENST00000483851 C1DQ13901 141 aaKnown RBP23.78■■□□□ 1.4
SHOX2-204ENST00000483851 MAMDC2Q7Z304 686 aaPredicted RBP23.78■■□□□ 1.4
SHOX2-204ENST00000483851 LRRC75AQ8NAA5 344 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 SLC37A3Q8NCC5 494 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 NTNG2Q96CW9 530 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 SGCZQ96LD1 299 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 MMP27Q9H306 513 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 PCNX3Q9H6A9 2034 aa23.78■■□□□ 1.4
SHOX2-204ENST00000483851 TMEM72A0PK05 275 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 ZNF208O43345 1280 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 SSX1Q16384 188 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 OR5M10Q6IEU7 315 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 NANOGNBQ7Z5D8 188 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 CENPSQ8N2Z9 138 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PSD4Q8NDX1 1056 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PAQR8Q8TEZ7 354 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PTP4A1Q93096 173 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 OPALINQ96PE5 141 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 SH2D2AQ9NP31 389 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 HAO2Q9NYQ3 351 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 IER3IP1Q9Y5U9 82 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 TMEM129A0AVI4 362 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 MYL12BO14950 172 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PFDN1O60925 122 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 SLC34A2O95436 690 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 CD14P08571 375 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 RPS5P46782 204 aaKnown RBP23.77■■□□□ 1.4
SHOX2-204ENST00000483851 SPHARQ15513 63 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 ALG10Q5BKT4 473 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 EMC4Q5J8M3 183 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 C1orf140Q5VVS0 124 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 BICRALQ6AI39 1079 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 JMJD6Q6NYC1 403 aaPredicted RBP23.77■■□□□ 1.4
SHOX2-204ENST00000483851 IL20RBQ6UXL0 311 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 TMEM156Q8N614 296 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 FADS6Q8N9I5 356 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 DRAXINQ8NBI3 349 aaPredicted RBP23.77■■□□□ 1.4
SHOX2-204ENST00000483851 MCFD2Q8NI22 146 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PTDSS2Q9BVG9 487 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 COL25A1Q9BXS0 654 aaPredicted RBP23.77■■□□□ 1.4
SHOX2-204ENST00000483851 ANGPTL4Q9BY76 406 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 PTGES2Q9H7Z7 377 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 FAM86C1Q9NVL1 165 aa23.77■■□□□ 1.4
SHOX2-204ENST00000483851 CCDC59Q9P031 241 aaKnown RBP23.77■■□□□ 1.4
SHOX2-204ENST00000483851 C2orf72A6NCS6 295 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 FAM183AA6NL82 134 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 BLOC1S5-TXNDC5H3BN57 136 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 AHSA1O95433 338 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 TXNDC12O95881 172 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 SCG5P05408 212 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 CRMP1Q14194 572 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 MFSD13AQ14CX5 517 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 MED22Q15528 200 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 TSTQ16762 297 aaKnown RBP23.76■■□□□ 1.39
SHOX2-204ENST00000483851 ZNF404Q494X3 552 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 SOWAHCQ53LP3 525 aaPredicted RBP23.76■■□□□ 1.39
SHOX2-204ENST00000483851 BBS1Q8NFJ9 593 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 KBTBD8Q8NFY9 601 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 OR2M3Q8NG83 312 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 PPP1R14BQ96C90 147 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 CENPOQ9BU64 300 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 CLEC2DQ9UHP7 191 aa23.76■■□□□ 1.39
SHOX2-204ENST00000483851 B4DXG7 233 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 FAM47E-STBD1D6RA91 191 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 CCRL2O00421 344 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 IGHA1P01876 353 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 HSMCR30P0CW71 290 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 AQP2P41181 271 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 INAQ16352 499 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 RGS21Q2M5E4 152 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 GPALPP1Q8IXQ4 340 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 HPF1Q9NWY4 346 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 HIST1H1CP16403 213 aaKnown RBP23.75■■□□□ 1.39
SHOX2-204ENST00000483851 SLC2A5P22732 501 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 F8A1P23610 371 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 FKBP2P26885 142 aaKnown RBP23.75■■□□□ 1.39
SHOX2-204ENST00000483851 Q0VFX4 171 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 SGCBQ16585 318 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 PLPPR5Q32ZL2 321 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 SLC22A10Q63ZE4 541 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 POMZP3Q6PJE2 187 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 LSRQ86X29 649 aaPredicted RBP23.75■■□□□ 1.39
SHOX2-204ENST00000483851 OR52E2Q8NGJ4 325 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 MOSPD2Q8NHP6 518 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 OTULINQ96BN8 352 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 TEAD3Q99594 435 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 KATNB1Q9BVA0 655 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 CDADC1Q9BWV3 514 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 RNF167Q9H6Y7 350 aa23.75■■□□□ 1.39
SHOX2-204ENST00000483851 SPAARA0A1B0GVQ0 90 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 ADH6P28332 368 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 IFITM3Q01628 133 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.74■■□□□ 1.39
SHOX2-204ENST00000483851 POU4F2Q12837 409 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 GPR139Q6DWJ6 353 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 FAM122BQ7Z309 247 aa23.74■■□□□ 1.39
SHOX2-204ENST00000483851 FAM98AQ8NCA5 519 aaKnown RBP23.74■■□□□ 1.39
SHOX2-204ENST00000483851 ABTB1Q969K4 478 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms