RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FTCDNL1E5RQL4 147 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 SLCO1B7G3V0H7 640 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 H7C417 338 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 UBDO15205 165 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 HNRNPCL1O60812 293 aaKnown RBP15.71■□□□□ 0.11
ATG4B-221ENST00000483778 HNRNPCL4P0DMR1 293 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 NCF2P19878 526 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-221ENST00000483778 APOBEC3AP31941 199 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-221ENST00000483778 CRISP3P54108 245 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 TGFBR3Q03167 851 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 RGNQ15493 299 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 SWI5Q1ZZU3 235 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 TMEM249Q2WGJ8 235 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 ELOA3BQ3SY89 546 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 C6orf10Q5SRN2 563 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF544Q6NX49 715 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 MSRB3Q8IXL7 192 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 C17orf78Q8N4C9 275 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 POMGNT2Q8NAT1 580 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 ELOA3Q8NG57 546 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 SLC25A36Q96CQ1 311 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 KTI12Q96EK9 354 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-221ENST00000483778 TNFRSF13CQ96RJ3 184 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 NELFAQ9H3P2 528 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 TMBIM4Q9HC24 238 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 CALML5Q9NZT1 146 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 ZNF232Q9UNY5 417 aa15.71■□□□□ 0.11
ATG4B-221ENST00000483778 A0A096LPE4 126 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 A0A1W2PPZ6 126 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 A8MV72 311 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-221ENST00000483778 CLIC1O00299 241 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 UQCRBP14927 111 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 RPS5P46782 204 aaKnown RBP15.7■□□□□ 0.1
ATG4B-221ENST00000483778 SLC18A1P54219 525 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 LARS2Q15031 903 aaKnown RBP15.7■□□□□ 0.1
ATG4B-221ENST00000483778 TBRG1Q3YBR2 411 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF311Q5JNZ3 666 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 NIPAL3Q6P499 406 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 CLEC2AQ6UVW9 174 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 EPGNQ6UW88 154 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 CROCCP2Q86T23 111 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 FUNDC1Q8IVP5 155 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 C10orf105Q8TEF2 133 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 FBXO17Q96EF6 278 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF837Q96EG3 531 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-221ENST00000483778 BOD1Q96IK1 185 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 ALKBH3Q96Q83 286 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-221ENST00000483778 TAPBPLQ9BX59 468 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 FKRPQ9H9S5 495 aa15.7■□□□□ 0.1
ATG4B-221ENST00000483778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.69■□□□□ 0.18e-8■■■■■ 33.7
ATG4B-221ENST00000483778 TPST1O60507 370 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 PNMTP11086 282 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 EFNA4P52798 201 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 COPZ1P61923 177 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 LOXL1Q08397 574 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-221ENST00000483778 GLIPR1L2Q4G1C9 344 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 C6orf52Q5T4I8 152 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 PRAMEF8Q5VWM4 474 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 PRAMEF7Q5VXH5 474 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 MYPOPQ86VE0 399 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-221ENST00000483778 MIER2Q8N344 545 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 FAM168AQ92567 244 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 TAAR8Q969N4 342 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 WFDC6Q9BQY6 131 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 PIF1Q9H611 641 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 RMND5AQ9H871 391 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 BCL2L10Q9HD36 194 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 A4GALTQ9NPC4 353 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 SLC52A3Q9NQ40 469 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 TMEM45AQ9NWC5 275 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 USH1CQ9Y6N9 552 aa15.69■□□□□ 0.1
ATG4B-221ENST00000483778 KRT33AO76009 404 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF432O94892 652 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 F12P00748 615 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-221ENST00000483778 CELA3BP08861 270 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 BMP2P12643 396 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 CBLP22681 906 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 HTR2AP28223 471 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 CALCRP30988 508 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 CLDN17P56750 224 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 ANKRD16Q6P6B7 361 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 MSANTD1Q6ZTZ1 278 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 WDFY1Q8IWB7 410 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 MFSD8Q8NHS3 518 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 SPATA3Q8NHX4 192 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 STK35Q8TDR2 534 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 SORCS2Q96PQ0 1159 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 NKIRAS1Q9NYS0 192 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 B3GAT1Q9P2W7 334 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 RASD1Q9Y272 281 aa15.68■□□□□ 0.1
ATG4B-221ENST00000483778 IGKV1D-42A0A075B6H8 117 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF503-AS2A6NEH8 195 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF587BE7ETH6 402 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 WNT11O96014 354 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 IGHV4-31P0DP07 118 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 DSCR9P59020 149 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 ARF1P84077 181 aaKnown RBP15.67■□□□□ 0.1
ATG4B-221ENST00000483778 VLDLRP98155 873 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms