RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SPCS2Q15005 226 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 ALG10Q5BKT4 473 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 EMC4Q5J8M3 183 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 HIST3H2AQ7L7L0 130 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 MAMDC2Q7Z304 686 aaPredicted RBP12.71□□□□□ -0.38
CLK3-204ENST00000483723 ATCAYQ86WG3 371 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 OR4K13Q8NH42 304 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 POC1BQ8TC44 478 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 ZFAND2BQ8WV99 257 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 HIST1H2ACQ93077 130 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 POTEKPQ9BYX7 375 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 FAM86C1Q9NVL1 165 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 WDR70Q9NW82 654 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 TAS2R5Q9NYW4 299 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 TNFRSF10DQ9UBN6 386 aa12.71□□□□□ -0.38
CLK3-204ENST00000483723 SPAARA0A1B0GVQ0 90 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 MYL12BO14950 172 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 EFNA2O43921 213 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 APOL3O95236 402 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 CSRP1P21291 193 aaKnown RBP12.7□□□□□ -0.38
CLK3-204ENST00000483723 WNT4P56705 351 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 IL10RAQ13651 578 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 SSX1Q16384 188 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 SGCBQ16585 318 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 POMZP3Q6PJE2 187 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 NANOGNBQ7Z5D8 188 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 CYB561A3Q8NBI2 242 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 OR5J2Q8NH18 312 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 PSMF1Q92530 271 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 C1GALT1C1Q96EU7 318 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 SGCZQ96LD1 299 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 NDEL1Q9GZM8 345 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
CLK3-204ENST00000483723 SPEGQ15772 3267 aa12.7□□□□□ -0.38
CLK3-204ENST00000483723 STMND1H3BQB6 276 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 CCRL2O00421 344 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 AHSA1O95433 338 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ZNF182P17025 639 aaPredicted RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 GADD45AP24522 165 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 CD82P27701 267 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ADH6P28332 368 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 SDHAP31040 664 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 SLC25A1P53007 311 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ACSM1Q08AH1 577 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 FOXF1Q12946 379 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 C1DQ13901 141 aaKnown RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 INPP5JQ15735 1006 aaPredicted RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 TSTQ16762 297 aaKnown RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 GPR139Q6DWJ6 353 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ACBD7Q8N6N7 88 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 SIRT6Q8N6T7 355 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 EXD3Q8N9H8 876 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 FAM98AQ8NCA5 519 aaKnown RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 SDR9C7Q8NEX9 313 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 OR52N1Q8NH53 320 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 NKD1Q969G9 470 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 OTULINQ96BN8 352 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 Q96M85 177 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ARHGAP9Q9BRR9 750 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 OR11A1Q9GZK7 315 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 OR51V1Q9H2C8 321 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
CLK3-204ENST00000483723 DMDP11532 3685 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 KNTC1P50748 2209 aa12.69□□□□□ -0.38
CLK3-204ENST00000483723 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TM4SF5O14894 197 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 AIREO43918 545 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 BCL10O95999 233 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 SBK2P0C263 348 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 HSMCR30P0CW71 290 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 CCL3P10147 92 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 CLUP10909 449 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 GRPRP30550 384 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 IDUAP35475 653 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 UGT2B10P36537 528 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 CDKN2AP42771 156 aaKnown RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 ZNF41P51814 821 aaPredicted RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 ZP4Q12836 540 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TPBGQ13641 420 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 GGTLC2Q14390 218 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 MFSD13AQ14CX5 517 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 KLHL12Q53G59 568 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 ZNF468Q5VIY5 522 aaPredicted RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 B3GLCTQ6Y288 498 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 LHFPL3Q86UP9 236 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 PLCZ1Q86YW0 608 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 TMEM156Q8N614 296 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 OR51G2Q8NGK0 314 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 RPL3LQ92901 407 aaKnown RBP12.68□□□□□ -0.38
CLK3-204ENST00000483723 RASD2Q96D21 266 aa12.68□□□□□ -0.38
CLK3-204ENST00000483723 NMNAT3Q96T66 252 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms