RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 RPH3AQ9Y2J0 694 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-226ENST00000483656 TPRKBQ9Y3C4 175 aa9.1□□□□□ -0.95
HDAC6-226ENST00000483656 ADAM18Q9Y3Q7 739 aa9.1□□□□□ -0.95
HDAC6-226ENST00000483656 IER3IP1Q9Y5U9 82 aa9.1□□□□□ -0.95
HDAC6-226ENST00000483656 KCNMB2Q9Y691 235 aa9.1□□□□□ -0.95
HDAC6-226ENST00000483656 MAP1BP46821 2468 aaKnown RBP9.1□□□□□ -0.95
HDAC6-226ENST00000483656 LIPT2A6NK58 231 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 CLCA1A8K7I4 914 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 H3BML4 177 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 BLOC1S5-TXNDC5H3BN57 136 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 M0R082 166 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 PLPP3O14495 311 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ARPC3O15145 178 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 OR2T1O43869 369 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 NME2P1O60361 137 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 CLPTM1O96005 669 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MT-ND2P03891 347 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 TFPIP10646 304 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 PEPDP12955 493 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 NME2P22392 152 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 EEF1B2P24534 225 aaKnown RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 IDUAP35475 653 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 PRPS1P60891 318 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ERVK-25P63136 954 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MVKQ03426 396 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 DBPQ10586 325 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MYBPHQ13203 477 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 SELENBP1Q13228 472 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 SGCBQ16585 318 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MAMDC2Q7Z304 686 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 FAM122BQ7Z309 247 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 YRDCQ86U90 279 aaKnown RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 CPOQ8IVL8 374 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 SPARTQ8N0X7 666 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ZNF540Q8NDQ6 660 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 BBS1Q8NFJ9 593 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 OR5J2Q8NH18 312 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ZNF417Q8TAU3 575 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 IPCEF1Q8WWN9 437 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 PTP4A1Q93096 173 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 DDIT4LQ96D03 193 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 SCMH1Q96GD3 660 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 LRR1Q96L50 414 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 Q96MT0 163 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ERMAPQ96PL5 475 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 ZNF587Q96SQ5 575 aaPredicted RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 KATNB1Q9BVA0 655 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 TAPBPLQ9BX59 468 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 HCAR1Q9BXC0 346 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 OR2B2Q9GZK3 357 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 TMEM185BQ9H7F4 350 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 KLHL1Q9NR64 748 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 SERINC1Q9NRX5 453 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MRPL39Q9NYK5 338 aaKnown RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 BLOC1S6Q9UL45 172 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 MRPS18CQ9Y3D5 142 aaKnown RBP9.09□□□□□ -0.95
HDAC6-226ENST00000483656 CSAG2Q9Y5P2 127 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 NCKAP5O14513 1909 aa9.09□□□□□ -0.95
HDAC6-226ENST00000483656 A0A1W2PNR3 127 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 FAM183AA6NL82 134 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MS4A18H0YCH9 400 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 IMPA2O14732 288 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 GLSO94925 669 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 TXNDC12O95881 172 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 HIST1H2ABP04908 130 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 F13BP05160 661 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CDK1P06493 297 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CD14P08571 375 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 DBTP11182 482 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 HIST1H1CP16403 213 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF17P17021 662 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 PCMT1P22061 227 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 NOS3P29474 1203 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 RPL4P36578 427 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 RFC3P40938 356 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 RPL5P46777 297 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CLK1P49759 484 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 P2RY4P51582 365 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CTXN1P60606 82 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ZNF91Q05481 1191 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ZP4Q12836 540 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ITGADQ13349 1161 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 PMS2P3Q13401 168 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CRMP1Q14194 572 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 OR7A5Q15622 319 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MS4A18Q3C1V0 323 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 TMEM176BQ3YBM2 270 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ALG10Q5BKT4 473 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 MEDAGQ5VYS4 303 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 XAF1Q6GPH4 301 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 C3orf33Q6P1S2 294 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 ARHGAP11AQ6P4F7 1023 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 NHLRC1Q6VVB1 395 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 KCTD8Q6ZWB6 473 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 AHSA2Q719I0 299 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 HIST3H2AQ7L7L0 130 aa9.08□□□□□ -0.96
HDAC6-226ENST00000483656 CXXC5Q7LFL8 322 aaKnown RBP9.08□□□□□ -0.96
HDAC6-226ENST00000483656 GALNTL5Q7Z4T8 443 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms