RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 NANOGP8Q6NSW7 305 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 COMTD1Q86VU5 262 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 P3H2Q8IVL5 708 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 POMGNT2Q8NAT1 580 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 SMYD1Q8NB12 490 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 PCYOX1LQ8NBM8 494 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 OR8J3Q8NGG0 315 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 SLC26A7Q8TE54 656 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 LRRC58Q96CX6 371 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 KTI12Q96EK9 354 aaPredicted RBP12.24□□□□□ -0.45
VARS-225ENST00000482996 EPYCQ99645 322 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 ECSITQ9BQ95 431 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 NANOGQ9H9S0 305 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 GID8Q9NWU2 228 aa12.24□□□□□ -0.45
VARS-225ENST00000482996 SETD2Q9BYW2 2564 aaPredicted RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 FTCDNL1E5RQL4 147 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 AIM2O14862 343 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 SLC22A2O15244 555 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 FMO6PO60774 539 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 KRT33AO76009 404 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 LGI1O95970 557 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 OPN1SWP03999 348 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 P2RY4P51582 365 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 SEC24CP53992 1094 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 EGR4Q05215 589 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 MFSD13AQ14CX5 517 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 VMACQ2NL98 169 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 TSPO2Q5TGU0 170 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 GKAP1Q5VSY0 366 aaPredicted RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 SHEQ5VZ18 495 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 REP15Q6BDI9 236 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 ABHD12BQ7Z5M8 362 aaPredicted RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 SNX32Q86XE0 403 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 LRRC75A-AS1Q8N1F1 130 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 ZNF611Q8N823 705 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 ANKS4BQ8N8V4 417 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 ZIC4Q8N9L1 334 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 BCAS4Q8TDM0 211 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 TMEM171Q8WVE6 324 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 RASSF5Q8WWW0 418 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 AKAP1Q92667 903 aaKnown RBP eCLIP12.23□□□□□ -0.45
VARS-225ENST00000482996 ZNF385AQ96PM9 386 aaKnown RBP12.23□□□□□ -0.45
VARS-225ENST00000482996 MCHR1Q99705 422 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 PTDSS2Q9BVG9 487 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 SLCO5A1Q9H2Y9 848 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
VARS-225ENST00000482996 A0A087WUJ7 227 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 A0A0B4J2E0 115 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 LOC100653049A0A140TA62 436 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 A0A1B0GX12 115 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 M0R3H8 397 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 TMCC2O75069 709 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 KRT34O76011 436 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 FAM107AO95990 144 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ITGA5P08648 1049 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ZNF43P17038 809 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 MPGP29372 298 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 HOXC12P31275 282 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ADAM8P78325 824 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 BSPH1Q075Z2 132 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 C1DQ13901 141 aaKnown RBP12.22□□□□□ -0.45
VARS-225ENST00000482996 GABRA6Q16445 453 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 NRF1Q16656 503 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 DUSP7Q16829 419 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 RABL3Q5HYI8 236 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ZNF613Q6PF04 617 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 KLHL17Q6TDP4 642 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 CREB3L2Q70SY1 520 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 C1orf162Q8NEQ5 155 aaPredicted RBP12.22□□□□□ -0.45
VARS-225ENST00000482996 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 OR52N5Q8NH56 324 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 MUS81Q96NY9 551 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 ARHGDIGQ99819 225 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 B3GALT5Q9Y2C3 310 aa12.22□□□□□ -0.45
VARS-225ENST00000482996 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 USF3Q68DE3 2245 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 IGKV1D-42A0A075B6H8 117 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 DPRXA6NFQ7 191 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 ZNF587BE7ETH6 402 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 M0R082 166 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 PDLIM1O00151 329 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 FXYD1O00168 92 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 FZD7O75084 574 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 GRPRP30550 384 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 GZMMP51124 257 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 CDH12P55289 794 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 IL1RL1Q01638 556 aa12.21□□□□□ -0.45
VARS-225ENST00000482996 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
VARS-225ENST00000482996 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms