RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	FAM215A	Q9Y5M1	114 aa		13.72	□□□□□ -0.21
CCM2-215	ENST00000482714	MPDZ	O75970	2070 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	TENM4	Q6N022	2769 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	ENO4	A6NNW6	628 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714		H3BNX3	289 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	GPR171	O14626	319 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	ZNHIT1	O43257	154 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	TSPAN19	P0C672	248 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	ANXA8	P13928	327 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	FUT4	P22083	530 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	GNLY	P22749	145 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	GRPR	P30550	384 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	CEACAM8	P31997	349 aa	Predicted RBP	13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	SLC16A1	P53985	500 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	POU4F3	Q15319	338 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	SEC23B	Q15437	767 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	C4orf17	Q53FE4	359 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	RIPPLY2	Q5TAB7	128 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	SHQ1	Q6PI26	577 aa	Known RBP	13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	RPTN	Q6XPR3	784 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	ZER1	Q7Z7L7	766 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	P3H2	Q8IVL5	708 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	SVOPL	Q8N434	492 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	OR5K1	Q8NHB7	308 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	PFN4	Q8NHR9	129 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	PRR7	Q8TB68	274 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	FNDC9	Q8TBE3	224 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	GNPDA2	Q8TDQ7	276 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	RNF128	Q8TEB7	428 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	GIPC3	Q8TF64	312 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	LRTOMT	Q8WZ04	291 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	DMRTA2	Q96SC8	542 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	CHST11	Q9NPF2	352 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	C20orf141	Q9NUB4	165 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	TINAG	Q9UJW2	476 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	MGAT4B	Q9UQ53	548 aa		13.71	□□□□□ -0.21
CCM2-215	ENST00000482714	HSPB2	A8KAH6	182 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	ZNF724	A8MTY0	619 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	EFCAB9	A8MZ26	197 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	CCL21	O00585	134 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	SMAD9	O15198	467 aa	Known RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	OR6A2	O95222	327 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	TGM6	O95932	706 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	GLI4	P10075	376 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	GSTM3	P21266	225 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	PRPS1	P60891	318 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	ELF3	P78545	371 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	FOXD4	Q12950	439 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	PMS2P3	Q13401	168 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	HSPB2	Q16082	182 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	CD300LD	Q6UXZ3	194 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	PXK	Q7Z7A4	578 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	ZDHHC13	Q8IUH4	622 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	MCEMP1	Q8IX19	187 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	TMEM99	Q8N816	258 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	DNAJC9	Q8WXX5	260 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	OXGR1	Q96P68	337 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	MOGAT1	Q96PD6	335 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	DGCR6L	Q9BY27	220 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	DCLRE1B	Q9H816	532 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	BCO1	Q9HAY6	547 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.7	□□□□□ -0.22
CCM2-215	ENST00000482714		U3KQV3	271 aa		13.7	□□□□□ -0.22
CCM2-215	ENST00000482714	IGKV3D-15	A0A087WSY6	115 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714		G3V2T6	193 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714		H0YHG0	523 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	KPNA4	O00629	521 aa	Predicted RBP	13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	PLPP3	O14495	311 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	KLF4	O43474	513 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	PTP4A3	O75365	173 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	AKR7A3	O95154	331 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	IL18BP	O95998	194 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	PLA2G2A	P14555	144 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	FPR3	P25089	353 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	P2RY4	P51582	365 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	LSM11	P83369	360 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	RASGEF1B	Q0VAM2	473 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	TSPAN31	Q12999	210 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	SEM1	Q6ZVN7	128 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	SLC46A3	Q7Z3Q1	461 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	OAF	Q86UD1	273 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	ROBO4	Q8WZ75	1007 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	RND1	Q92730	232 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	NDEL1	Q9GZM8	345 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	EMC3	Q9P0I2	261 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	PDP1	Q9P0J1	537 aa	Predicted RBP	13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	HIF3A	Q9Y2N7	669 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	MYO18B	Q8IUG5	2567 aa		13.69	□□□□□ -0.22
CCM2-215	ENST00000482714	MS4A18	H0YCH9	400 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714		M0R082	166 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	AQP8	O94778	261 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	GAST	P01350	101 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	YES1	P07947	543 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	SAG	P10523	405 aa	Predicted RBP	13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	MAK	P20794	623 aa		13.68	□□□□□ -0.22
CCM2-215	ENST00000482714	GSS	P48637	474 aa		13.68	□□□□□ -0.22

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