RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 POMGNT2Q8NAT1 580 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 C1orf162Q8NEQ5 155 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 MFSD8Q8NHS3 518 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 KTI12Q96EK9 354 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 PTDSS2Q9BVG9 487 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 C12orf10Q9HB07 376 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 TMEM27Q9HBJ8 222 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 AMDHD2Q9Y303 409 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 MAGED1Q9Y5V3 778 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-212ENST00000482478 DSCAMO60469 2012 aa13.8□□□□□ -0.2
COL16A1-212ENST00000482478 DPRXA6NFQ7 191 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 TRIM64A6NGJ6 449 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 TRIM64BA6NI03 449 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 H7C1Q1 480 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 M0R082 166 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 AIM2O14862 343 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SMAD7O15105 426 aaKnown RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 AKAP8O43823 692 aaKnown RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 TPST1O60507 370 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 TMCC2O75069 709 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SOD3P08294 240 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 INHBBP09529 407 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 FOSL1P15407 271 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 NQO1P15559 274 aaKnown RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 CBLP22681 906 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 MPGP29372 298 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 PCGF2P35227 344 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 CDKN1AP38936 164 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SELENOPP49908 381 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ARFIP2P53365 341 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 EGR4Q05215 589 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 DMTNQ08495 405 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 RBBP4Q09028 425 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 C1DQ13901 141 aaKnown RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 MAPRE2Q15555 327 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ADRM1Q16186 407 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 FAM69AQ5T7M9 428 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ULK3Q6PHR2 472 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SLC30A8Q8IWU4 369 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 VANGL1Q8TAA9 524 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF417Q8TAU3 575 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SLC26A7Q8TE54 656 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SMAP2Q8WU79 429 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 EPYCQ99645 322 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 GSX1Q9H4S2 264 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-212ENST00000482478 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SEC14L4Q9UDX3 406 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 SLC25A15Q9Y619 301 aa13.79□□□□□ -0.2
COL16A1-212ENST00000482478 ROS1P08922 2347 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 TRAV36DV7A0A075B6V5 113 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 A0A1B0GX12 115 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 FTCDNL1E5RQL4 147 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 PDLIM1O00151 329 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 OR2T1O43869 369 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF43P17038 809 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 PTAFRP25105 342 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 GRPRP30550 384 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 P2RY4P51582 365 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 CLDN17P56750 224 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 OR1Q1Q15612 314 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 GABRA6Q16445 453 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 INTS11Q5TA45 600 aaKnown RBP13.78□□□□□ -0.2
COL16A1-212ENST00000482478 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 REP15Q6BDI9 236 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 C10orf53Q8N6V4 93 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 LSMEM1Q8N8F7 131 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 OR10A6Q8NH74 314 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 TSPEARQ8WU66 669 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 C1QTNF6Q9BXI9 259 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 PIF1Q9H611 641 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 ZNF446Q9NWS9 450 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 CISD1Q9NZ45 108 aaKnown RBP13.78□□□□□ -0.2
COL16A1-212ENST00000482478 KLHL14Q9P2G3 628 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 MGAT4BQ9UQ53 548 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 PRR14LQ5THK1 2151 aa13.78□□□□□ -0.2
COL16A1-212ENST00000482478 IGKV1D-42A0A075B6H8 117 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 CPSF4LA6NMK7 179 aaKnown RBP13.77□□□□□ -0.21
COL16A1-212ENST00000482478 BBIP1A8MTZ0 92 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 SHISA9B4DS77 424 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 MRASO14807 208 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 LGI1O95970 557 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 WNT11O96014 354 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 CD40P25942 277 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
COL16A1-212ENST00000482478 SLC25A3Q00325 362 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 GUCY1A3Q02108 690 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 LGALS3BPQ08380 585 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 VEZF1Q14119 521 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 HIKESHIQ53FT3 197 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 HMBOX1Q6NT76 420 aa13.77□□□□□ -0.21
COL16A1-212ENST00000482478 PRSS57Q6UWY2 283 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms