RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TRBV5-3A0A0A0MS03 114 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 A0A1W2PR80 420 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 TMEM229AB2RXF0 380 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 SMAD7O15105 426 aaKnown RBP17.5■□□□□ 0.39
MSH5-215ENST00000482280 ITGA5P08648 1049 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 PAX1P15863 534 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 NTF4P34130 210 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 ETFDHQ16134 617 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 HSP90B2PQ58FF3 399 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 RUNDC3AQ59EK9 446 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 AGAP6Q5VW22 663 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 FAM91A1Q658Y4 838 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 NIPAL3Q6P499 406 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 NET1Q7Z628 596 aaPredicted RBP17.5■□□□□ 0.39
MSH5-215ENST00000482280 ANKRD27Q96NW4 1050 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 ZNF385AQ96PM9 386 aaKnown RBP17.5■□□□□ 0.39
MSH5-215ENST00000482280 CGREF1Q99674 301 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 FKRPQ9H9S5 495 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 SLC25A15Q9Y619 301 aa17.5■□□□□ 0.39
MSH5-215ENST00000482280 A0A1B0GWA3 101 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 AIM2O14862 343 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 AKAP8O43823 692 aaKnown RBP17.49■□□□□ 0.39
MSH5-215ENST00000482280 NPIPB7O75200 414 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 NQO1P15559 274 aaKnown RBP17.49■□□□□ 0.39
MSH5-215ENST00000482280 CYLC2Q14093 348 aaPredicted RBP17.49■□□□□ 0.39
MSH5-215ENST00000482280 MFSD13AQ14CX5 517 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 MMEL1Q495T6 779 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 FAM69AQ5T7M9 428 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 INTS11Q5TA45 600 aaKnown RBP17.49■□□□□ 0.39
MSH5-215ENST00000482280 C6orf89Q6UWU4 347 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 DLEU7Q6UYE1 221 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 CREB3L2Q70SY1 520 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 DPP10Q8N608 796 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 C10orf53Q8N6V4 93 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 LILRB1Q8NHL6 650 aaPredicted RBP17.49■□□□□ 0.39
MSH5-215ENST00000482280 NEUROG1Q92886 237 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 HS6ST2Q96MM7 605 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 SH3GL1Q99961 368 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 KCNS3Q9BQ31 491 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 C1QTNF6Q9BXI9 259 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 IKZF5Q9H5V7 419 aa17.49■□□□□ 0.39
MSH5-215ENST00000482280 TRAV36DV7A0A075B6V5 113 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 SOD3P08294 240 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 PAX7P23759 505 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 CD40P25942 277 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 MTPNP58546 118 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 UBE2NP61088 152 aaKnown RBP17.48■□□□□ 0.39
MSH5-215ENST00000482280 HMBOX1Q6NT76 420 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 SEZ6L2Q6UXD5 910 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 FBXL14Q8N1E6 418 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 KTI12Q96EK9 354 aaPredicted RBP17.48■□□□□ 0.39
MSH5-215ENST00000482280 TMEM120AQ9BXJ8 343 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 ASPNQ9BXN1 380 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 SLC17A5Q9NRA2 495 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 NPAP1Q9NZP6 1156 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 B3GALT5Q9Y2C3 310 aa17.48■□□□□ 0.39
MSH5-215ENST00000482280 DSCAMO60469 2012 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 TRIM64A6NGJ6 449 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 TRIM64BA6NI03 449 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 TPST1O60507 370 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 SASH3O75995 380 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 BMP4P12644 408 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 CLDN17P56750 224 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 VEZF1Q14119 521 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 PATL1Q86TB9 770 aaKnown RBP17.47■□□□□ 0.39
MSH5-215ENST00000482280 C10orf111Q8N326 155 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 ZIC4Q8N9L1 334 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 SMYD1Q8NB12 490 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 COX4I2Q96KJ9 171 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 OXGR1Q96P68 337 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 BARX1Q9HBU1 254 aaPredicted RBP17.47■□□□□ 0.39
MSH5-215ENST00000482280 OBP2BQ9NPH6 170 aa17.47■□□□□ 0.39
MSH5-215ENST00000482280 SHISA9B4DS77 424 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 PDLIM1O00151 329 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 SLC43A1O75387 559 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 DANCRP0C864 163 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 HTR2AP28223 471 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 CDKN1AP38936 164 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 SELENOPP49908 381 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 FABP6P51161 128 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 ARFIP2P53365 341 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 FOXG1P55316 489 aaPredicted RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 OR1Q1Q15612 314 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 ADRM1Q16186 407 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 SWT1Q5T5J6 900 aaKnown RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 H1FNTQ75WM6 255 aaPredicted RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 GPR137CQ8N3F9 429 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 RASSF5Q8WWW0 418 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 IGFBPL1Q8WX77 278 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 ADAD1Q96M93 576 aaKnown RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 ALKBH3Q96Q83 286 aaPredicted RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 SMR3AQ99954 134 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 DHRS9Q9BPW9 319 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 PTDSS2Q9BVG9 487 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 AMBRA1Q9C0C7 1298 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 ZNF385DQ9H6B1 395 aa17.46■□□□□ 0.39
MSH5-215ENST00000482280 MOV10Q9HCE1 1003 aaKnown RBP17.46■□□□□ 0.39
MSH5-215ENST00000482280 RCE1Q9Y256 329 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms