RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 NAXDQ8IW45 347 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PUSL1Q8N0Z8 303 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 TMEM199Q8N511 208 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CLDN19Q8N6F1 224 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 NRACQ8N912 160 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MDS2Q8NDY4 140 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 OR4F6Q8NGB9 312 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 OR4K1Q8NGD4 311 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 OR6M1Q8NGM8 313 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MCOLN3Q8TDD5 553 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 WFIKKN2Q8TEU8 576 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 FCAMRQ8WWV6 532 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 C22orf15Q8WYQ4 148 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CDS1Q92903 461 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 BADQ92934 168 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PTH2Q96A98 100 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RPEQ96AT9 228 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 FAF2Q96CS3 445 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 SGTBQ96EQ0 304 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 TEAD3Q99594 435 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 DHRS9Q9BPW9 319 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ECSITQ9BQ95 431 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RPP25Q9BUL9 199 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 TMEM109Q9BVC6 243 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RAB11FIP5Q9BXF6 653 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 UCK2Q9BZX2 261 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CXXC4Q9H2H0 198 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ZNF665Q9H7R5 613 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CAB39LQ9H9S4 337 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PLGRKTQ9HBL7 147 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 NOX4Q9NPH5 578 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 FGF21Q9NSA1 209 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MIOSQ9NXC5 875 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RCC2Q9P258 522 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 IL36RNQ9UBH0 155 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ZNF282Q9UDV7 671 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 STOML2Q9UJZ1 356 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ZNF221Q9UK13 617 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 MRPS28Q9Y2Q9 187 aaKnown RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 GMPPBQ9Y5P6 360 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 PEX16Q9Y5Y5 336 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 ALG6Q9Y672 507 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 V9GYY9 64 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 UBN2Q6ZU65 1347 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 CCDC7Q96M83 1385 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
VPS41-212ENST00000482217 ANKRD30BQ9BXX2 1392 aa3.62□□□□□ -1.83
VPS41-212ENST00000482217 NKX6-3A6NJ46 265 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FAM74A7A6NL05 159 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SHISA7A6NL88 538 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SMIM23A6NLE4 172 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 YJEFN3A6XGL0 299 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 B4DGG1 531 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FAM90A26D6RGX4 464 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 H0Y980 276 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 H3BTX0 84 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CCRL2O00421 344 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 TGOLN2O43493 480 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GATBO75879 557 aaKnown RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 AP2A2O94973 939 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 UTS2O95399 124 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CD160O95971 181 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SERPINA1P01009 418 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 OXTP01178 125 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ATP1A1P05023 1023 aaKnown RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 KLK1P06870 262 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GUSBP08236 651 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CBSLP0DN79 551 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SLC2A1P11166 492 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PSG1P11464 419 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ANXA3P12429 323 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 IRF2P14316 349 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CD58P19256 250 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GPX3P22352 226 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 IFNA8P32881 189 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CBSP35520 551 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 RFX3P48380 749 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 HCAR3P49019 387 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SGSHP51688 502 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 LBX1P52954 281 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PEX3P56589 373 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ERVK-8P63133 956 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CKAP4Q07065 602 aaKnown RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 MED21Q13503 144 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GPR18Q14330 331 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 MAD2L1BPQ15013 274 aaPredicted RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 TMED2Q15363 201 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 OR4D1Q15615 310 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ZNF77Q15935 545 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NDUFA9Q16795 377 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ISXQ2M1V0 245 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GPR33Q49SQ1 333 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CCDC58Q4VC31 144 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FAM74A3Q4VXF1 159 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PAN3Q58A45 887 aaKnown RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 DMRTC1Q5HYR2 192 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FFAR4Q5NUL3 377 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CCNJQ5T5M9 372 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 C9orf135Q5VTT2 229 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms