RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ADAM5Q6NVV9 412 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 LRRC75A-AS1Q8N1F1 130 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 ZIC4Q8N9L1 334 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 POMGNT2Q8NAT1 580 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 C1orf162Q8NEQ5 155 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-213ENST00000482192 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 SLC26A7Q8TE54 656 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 RASSF5Q8WWW0 418 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 MUS81Q96NY9 551 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 ZNF317Q96PQ6 595 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-213ENST00000482192 EPYCQ99645 322 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 ARHGDIGQ99819 225 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 ECSITQ9BQ95 431 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 GID8Q9NWU2 228 aa10.47□□□□□ -0.73
HMGN1-213ENST00000482192 LOC100653049A0A140TA62 436 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 OR6C65A6NJZ3 312 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 M0R3H8 397 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ARHGEF9O43307 516 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 TPST2O60704 377 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 KRT33AO76009 404 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 KRT34O76011 436 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 PLAUP00749 431 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ITGA5P08648 1049 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 HOXC12P31275 282 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 CDH12P55289 794 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 NKX6-1P78426 367 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-213ENST00000482192 VEZF1Q14119 521 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 MFSD13AQ14CX5 517 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 GABRA6Q16445 453 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 NRF1Q16656 503 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 C1QTNF12Q5T7M4 302 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 SHEQ5VZ18 495 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ERICH5Q6P6B1 374 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ZNF613Q6PF04 617 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 CCDC80Q76M96 950 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ABHD12BQ7Z5M8 362 aaPredicted RBP10.46□□□□□ -0.73
HMGN1-213ENST00000482192 CALHM3Q86XJ0 350 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 EPHX4Q8IUS5 362 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 C17orf78Q8N4C9 275 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ZNF611Q8N823 705 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 GPR32P1Q8NGA4 272 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 OR6S1Q8NH40 331 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 C10orf82Q8WW14 230 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.73
HMGN1-213ENST00000482192 TAAR8Q969N4 342 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 TAMM41Q96BW9 452 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 MCHR1Q99705 422 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 WFDC6Q9BQY6 131 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 TMUB1Q9BVT8 246 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 AMBRA1Q9C0C7 1298 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 ARMCX1Q9P291 453 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 B3GALT5Q9Y2C3 310 aa10.46□□□□□ -0.73
HMGN1-213ENST00000482192 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.74
HMGN1-213ENST00000482192 SPG11Q96JI7 2443 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 MPDZO75970 2070 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 DPRXA6NFQ7 191 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 M0R082 166 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 AIM2O14862 343 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 CHP2O43745 196 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 CCDC22O60826 627 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 TMCC2O75069 709 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF43P17038 809 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 CD247P20963 164 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 MPGP29372 298 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 GRPRP30550 384 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 FOXD4Q12950 439 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 C1DQ13901 141 aaKnown RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 NPTX1Q15818 432 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 C9orf135Q5VTT2 229 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 NIPAL3Q6P499 406 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 KLHL17Q6TDP4 642 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 TMEM108Q6UXF1 575 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 H1FNTQ75WM6 255 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 P3H2Q8IVL5 708 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 ADPRHL1Q8NDY3 354 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 WFDC11Q8NEX6 87 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 OR6T1Q8NGN1 323 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 OR52N5Q8NH56 324 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 RP9Q8TA86 221 aaKnown RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 VANGL1Q8TAA9 524 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF417Q8TAU3 575 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 TMEM171Q8WVE6 324 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 FBXW5Q969U6 566 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 RADILQ96JH8 1075 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 OXGR1Q96P68 337 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF587Q96SQ5 575 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-213ENST00000482192 TMEM43Q9BTV4 400 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 CXorf56Q9H5V9 222 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 SEC14L4Q9UDX3 406 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 RCE1Q9Y256 329 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 CORINQ9Y5Q5 1042 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 SLC25A15Q9Y619 301 aa10.45□□□□□ -0.74
HMGN1-213ENST00000482192 LOC102725191A0A1B0GVB3 256 aa10.44□□□□□ -0.74
HMGN1-213ENST00000482192 CPSF4LA6NMK7 179 aaKnown RBP10.44□□□□□ -0.74
HMGN1-213ENST00000482192 ZNF587BE7ETH6 402 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms