RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NCBP1Q09161 790 aaKnown RBP3.76□□□□□ -1.81
SF3B1-210ENST00000482158 PLD1Q13393 1074 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 GPNMBQ14956 572 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 KLHL38Q2WGJ6 581 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 MAJINQ3KP22 176 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 FILIP1LQ4L180 1135 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 CTRB2Q6GPI1 263 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 HSDL2Q6YN16 418 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 EFL1Q7Z2Z2 1120 aaKnown RBP3.76□□□□□ -1.81
SF3B1-210ENST00000482158 MFSD6LQ8IWD5 586 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 BHLHE23Q8NDY6 225 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 FAM151AQ8WW52 585 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 ZNF606Q8WXB4 792 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 ARPC1AQ92747 370 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 RDH5Q92781 318 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 ITCHQ96J02 903 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 RPRD1AQ96P16 312 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-210ENST00000482158 KCNA7Q96RP8 456 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 CLCC1Q96S66 551 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 MBOAT4Q96T53 435 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 COPS8Q99627 209 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 SLC25A22Q9H936 323 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 LRRC40Q9H9A6 602 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 NANOGQ9H9S0 305 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 SEC14L3Q9UDX4 400 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 TRAF3IP3Q9Y228 551 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 ARHGAP21Q5T5U3 1957 aa3.76□□□□□ -1.81
SF3B1-210ENST00000482158 SCN2AQ99250 2005 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 IQANK1A0A1B0GTG1 560 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 PINLYPA6NC86 204 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 A8MXQ7 604 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 FOXE1O00358 373 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-210ENST00000482158 TSPAN12O95859 305 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 IGHDP01880 384 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 P04436 131 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 BTCP35070 178 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 RDXP35241 583 aaKnown RBP3.75□□□□□ -1.81
SF3B1-210ENST00000482158 GPM6AP51674 278 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 TAS2R19P59542 299 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 ARFRP1Q13795 201 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 SAMD4BQ5PRF9 694 aaKnown RBP3.75□□□□□ -1.81
SF3B1-210ENST00000482158 C1orf94Q6P1W5 598 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 IGFL2Q6UWQ7 119 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 ACP7Q6ZNF0 438 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 ZNF571Q7Z3V5 609 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-210ENST00000482158 CNPY4Q8N129 248 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 TRPV1Q8NER1 839 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 OR9G1Q8NH87 305 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 UCN3Q969E3 161 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 NRTNQ99748 197 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 NAT9Q9BTE0 207 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 FN3KRPQ9HA64 309 aa3.75□□□□□ -1.81
SF3B1-210ENST00000482158 PRG3Q9Y2Y8 225 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-210ENST00000482158 KIR2DL5BA0A0G2JN68 375 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 KIR2DL5BA0A0G2JPC4 375 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 MOSP00540 346 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 KLK3P07288 261 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 RCC1P18754 421 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 MDKP21741 143 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 PRDX3P30048 256 aaKnown RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 NUDT1P36639 197 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 VDAC2P45880 294 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 CEBPDP49716 269 aaPredicted RBP3.74□□□□□ -1.81
SF3B1-210ENST00000482158 SEC61GP60059 68 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 OR5I1Q13606 314 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 NRF1Q16656 503 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 KDELC1Q6UW63 502 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 ENPP6Q6UWR7 440 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 ECHDC2Q86YB7 292 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 PIANPQ8IYJ0 282 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 KIR2DL5AQ8N109 375 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 OR6C4Q8NGE1 309 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 OR1L4Q8NGR5 311 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 KIR2DL5BQ8NHK3 375 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 CXorf40BQ96DE9 158 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 TM4SF19Q96DZ7 209 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 ZNF414Q96IQ9 312 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 NRIP2Q9BQI9 281 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 TRIM62Q9BVG3 475 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 ACTR6Q9GZN1 396 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 CLCF1Q9UBD9 225 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 PIGLQ9Y2B2 252 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 TP53TG5Q9Y2B4 290 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 ASB3Q9Y575 518 aa3.74□□□□□ -1.81
SF3B1-210ENST00000482158 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 A0A1B0GVL5 298 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 GJE1A6NN92 205 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 AGPAT2O15120 278 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 CLDN9O95484 217 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 INSP01308 110 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 NR2C1P13056 603 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 MGMTP16455 207 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 IL12AP29459 219 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 TAGLN2P37802 199 aaKnown RBP3.73□□□□□ -1.81
SF3B1-210ENST00000482158 GLP1RP43220 463 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 ZNF133P52736 654 aaPredicted RBP3.73□□□□□ -1.81
SF3B1-210ENST00000482158 UNC119Q13432 240 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 CEP55Q53EZ4 464 aa3.73□□□□□ -1.81
SF3B1-210ENST00000482158 MARCH8Q5T0T0 291 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 288.2 ms