RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TGFBR3Q03167 851 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 EGR4Q05215 589 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 DMTNQ08495 405 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 ZSWIM7Q19AV6 140 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PAGE3Q5JUK9 113 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PRAMEF8Q5VWM4 474 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PRAMEF7Q5VXH5 474 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 LINGO2Q7L985 606 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 EPHX4Q8IUS5 362 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 C17orf78Q8N4C9 275 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 POMGNT2Q8NAT1 580 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 NFKBIDQ8NI38 313 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 BBS10Q8TAM1 723 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 KTI12Q96EK9 354 aaPredicted RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 ADAD1Q96M93 576 aaKnown RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 C7orf26Q96N11 449 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 MDFIQ99750 246 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PTDSS2Q9BVG9 487 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 PRR14Q9BWN1 585 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 ARMC7Q9H6L4 198 aa16.23■□□□□ 0.19
CLK1-211ENST00000481641 BARX1Q9HBU1 254 aaPredicted RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 CHD3Q12873 2000 aaKnown RBP16.23■□□□□ 0.19
CLK1-211ENST00000481641 C5orf58C9J3I9 102 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 FTCDNL1E5RQL4 147 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 UPK3AO75631 287 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 AHSA1O95433 338 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 PNMTP11086 282 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 FADDQ13158 208 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 NRF1Q16656 503 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 NIPAL3Q6P499 406 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 BLOC1S3Q6QNY0 202 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 GOLGA6L1Q8N7Z2 621 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 STK35Q8TDR2 534 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 LRRC8CQ8TDW0 803 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 ALKBH3Q96Q83 286 aaPredicted RBP16.22■□□□□ 0.19
CLK1-211ENST00000481641 RHNO1Q9BSD3 238 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 RAD21L1Q9H4I0 556 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 SLC52A3Q9NQ40 469 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 CCDC167Q9P0B6 97 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 MOKQ9UQ07 419 aa16.22■□□□□ 0.19
CLK1-211ENST00000481641 ELOA3DA6NLF2 546 aaPredicted RBP16.21■□□□□ 0.19
CLK1-211ENST00000481641 GPRIN2O60269 458 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 TPST1O60507 370 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 CRLF1O75462 422 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 ARAFP10398 606 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 HTR2AP28223 471 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 MRPL19P49406 292 aaKnown RBP16.21■□□□□ 0.19
CLK1-211ENST00000481641 TUBA1BP68363 451 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 TUBA4AP68366 448 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 ELOA3BQ3SY89 546 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 TBRG1Q3YBR2 411 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 LRIF1Q5T3J3 769 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 GCNT6Q5T4J0 391 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 KLHL24Q6TFL4 600 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 TUBA1AQ71U36 451 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 ELOA3Q8NG57 546 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 OR1K1Q8NGR3 316 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 MFSD8Q8NHS3 518 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 SPDL1Q96EA4 605 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 IKZF5Q9H5V7 419 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 PIF1Q9H611 641 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 FKRPQ9H9S5 495 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 TMEM45AQ9NWC5 275 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 VAPAQ9P0L0 249 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 RPS6KB2Q9UBS0 482 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 PRDM4Q9UKN5 801 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 RASD1Q9Y272 281 aa16.21■□□□□ 0.19
CLK1-211ENST00000481641 A0A096LPE4 126 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 A0A1W2PPZ6 126 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 ZNF587BE7ETH6 402 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 VAMP5O95183 116 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 TGDSO95455 350 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 WNT11O96014 354 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 TP53P04637 393 aaPredicted RBP16.2■□□□□ 0.18
CLK1-211ENST00000481641 CBLP22681 906 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 AQP5P55064 265 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 CLDN17P56750 224 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 RAB35Q15286 201 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 TTMPQ5BVD1 217 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 ZNF544Q6NX49 715 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 BCL2L2Q92843 193 aaPredicted RBP16.2■□□□□ 0.18
CLK1-211ENST00000481641 TAAR8Q969N4 342 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 YAE1D1Q9NRH1 226 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 ARFGEF3Q5TH69 2177 aa16.2■□□□□ 0.18
CLK1-211ENST00000481641 IGHV1-18A0A0C4DH31 117 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 A0A1B0GWA3 101 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 CD5LO43866 347 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 LY6HO94772 140 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 ETS2P15036 469 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 APOBEC3AP31941 199 aaPredicted RBP16.19■□□□□ 0.18
CLK1-211ENST00000481641 CDK6Q00534 326 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 AGKQ53H12 422 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 ABHD12BQ7Z5M8 362 aaPredicted RBP16.19■□□□□ 0.18
CLK1-211ENST00000481641 OR10H5Q8NGA6 315 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 WFDC6Q9BQY6 131 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 CCDC28BQ9BUN5 200 aa16.19■□□□□ 0.18
CLK1-211ENST00000481641 IGKV1D-42A0A075B6H8 117 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 A0A096LNT2 108 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms