RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 RANBP3LQ86VV4 465 aaPredicted RBP13.21□□□□□ -0.29
TDP2-205ENST00000480495 PTOV1Q86YD1 416 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 OR52N5Q8NH56 324 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 SLC38A4Q969I6 547 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.29
TDP2-205ENST00000480495 SLC47A1Q96FL8 570 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 ZNF385AQ96PM9 386 aaKnown RBP13.21□□□□□ -0.29
TDP2-205ENST00000480495 PTDSS2Q9BVG9 487 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 SLCO5A1Q9H2Y9 848 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 TMEM27Q9HBJ8 222 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 NPAP1Q9NZP6 1156 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 MGAT4BQ9UQ53 548 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 LAMP3Q9UQV4 416 aa13.21□□□□□ -0.29
TDP2-205ENST00000480495 PRR14LQ5THK1 2151 aa13.21□□□□□ -0.3
TDP2-205ENST00000480495 DSCAMO60469 2012 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 FLNAP21333 2647 aaKnown RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 TRAV36DV7A0A075B6V5 113 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 DANCRP0C864 163 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 RPS5P46782 204 aaKnown RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 FOXG1P55316 489 aaPredicted RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 MFSD13AQ14CX5 517 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 SWT1Q5T5J6 900 aaKnown RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 FAM69AQ5T7M9 428 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 KBTBD8Q8NFY9 601 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 SMAP2Q8WU79 429 aaPredicted RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 SLC25A36Q96CQ1 311 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 BDH2Q9BUT1 245 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 KAT8Q9H7Z6 458 aaKnown RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 ZNF446Q9NWS9 450 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 AMDHD2Q9Y303 409 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 MAGED1Q9Y5V3 778 aaPredicted RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 C2CD3Q4AC94 2353 aa13.2□□□□□ -0.3
TDP2-205ENST00000480495 ZNF469Q96JG9 3925 aaPredicted RBP13.2□□□□□ -0.3
TDP2-205ENST00000480495 ACANP16112 2415 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 SHISA9B4DS77 424 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 OVOL3O00110 214 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 ABCD4O14678 606 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 AIM2O14862 343 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 FMO6PO60774 539 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 KRT33AO76009 404 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 C8BP07358 591 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 INHBBP09529 407 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 ARFIP2P53365 341 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 DMTNQ08495 405 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 SELPLGQ14242 412 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 OR1Q1Q15612 314 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 COQ5Q5HYK3 327 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 INTS11Q5TA45 600 aaKnown RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 EPHX4Q8IUS5 362 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 WDR31Q8NA23 367 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 OR6S1Q8NH40 331 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 NEUROG1Q92886 237 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 TAAR8Q969N4 342 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 Q96MF0 132 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 EPYCQ99645 322 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 SLC17A5Q9NRA2 495 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 FGFR1OP2Q9NVK5 253 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 CISD1Q9NZ45 108 aaKnown RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 B3GALT5Q9Y2C3 310 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 ARID1AO14497 2285 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 SETD2Q9BYW2 2564 aaPredicted RBP13.19□□□□□ -0.3
TDP2-205ENST00000480495 VPS13CQ709C8 3753 aa13.19□□□□□ -0.3
TDP2-205ENST00000480495 IGKV1D-42A0A075B6H8 117 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 A0A087WUJ7 227 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 A0A0B4J2E0 115 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 A0A1B0GX12 115 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 ZNF587BE7ETH6 402 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 M0QX08 132 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 LGI1O95970 557 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 WNT11O96014 354 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 NPPAP01160 153 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 SOD3P08294 240 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 VIMP08670 466 aaKnown RBP13.18□□□□□ -0.3
TDP2-205ENST00000480495 ZNF43P17038 809 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 CD40P25942 277 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 PCGF2P35227 344 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 ZNF83P51522 516 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 CDH11P55287 796 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 ATP5J2P56134 94 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 NRF1Q16656 503 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 HSP90B2PQ58FF3 399 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 NIPAL3Q6P499 406 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 H1FNTQ75WM6 255 aaPredicted RBP13.18□□□□□ -0.3
TDP2-205ENST00000480495 DEPDC4Q8N2C3 294 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 SMYD1Q8NB12 490 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 ADPRHL1Q8NDY3 354 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 OR10A6Q8NH74 314 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
TDP2-205ENST00000480495 TRMT61AQ96FX7 289 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms