RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 C7orf34Q96L11 122 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ZNF300Q96RE9 604 aaPredicted RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 PRSS27Q9BQR3 290 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 MMADHCQ9H3L0 296 aaPredicted RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 CALHM2Q9HA72 323 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 C12orf10Q9HB07 376 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 SLC24A3Q9HC58 644 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 TIGARQ9NQ88 270 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 NDUFAF4Q9P032 175 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 CLCF1Q9UBD9 225 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 MCTS1Q9ULC4 181 aaKnown RBP8.08□□□□□ -1.12
VCP-206ENST00000480327 CLEC4AQ9UMR7 237 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 HDGFL3Q9Y3E1 203 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 TESMINQ9Y4I5 508 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ENPP4Q9Y6X5 453 aa8.08□□□□□ -1.12
VCP-206ENST00000480327 ERICH4A6NGS2 130 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CD8B2A6NJW9 211 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 LIPT2A6NK58 231 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 ZNF814B7Z6K7 855 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 LRRN3E7EW58 273 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 PIP5K1CO60331 668 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 NPIPB7O75200 414 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CIB2O75838 187 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 AKR7A3O95154 331 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 BMP5P22003 454 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 FKBP2P26885 142 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 UQCRC1P31930 480 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CLK1P49759 484 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 UGT2B15P54855 530 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 RAC3P60763 192 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CSNK2A1P68400 391 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 SIRPAP78324 504 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
VCP-206ENST00000480327 CHRNB3Q05901 458 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 ST3GAL3Q11203 375 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 FOXF2Q12947 444 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 TRAM2Q15035 370 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 DAZAP2Q15038 168 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 ZSCAN26Q16670 478 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 FGD3Q5JSP0 725 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 TBPL2Q6SJ96 375 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 LINC00114Q6XXX2 140 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 FCRLAQ7L513 359 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 ADGRE4PQ86SQ3 457 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 MEX3DQ86XN8 651 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 CCDC103Q8IW40 242 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 ADGRG5Q8IZF4 528 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 OR52J3Q8NH60 311 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 PFN4Q8NHR9 129 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 STK35Q8TDR2 534 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 ABHD3Q8WU67 409 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CANT1Q8WVQ1 401 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 WNT2BQ93097 391 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 TAAR8Q969N4 342 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 CPNE4Q96A23 557 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 ZNF775Q96BV0 537 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 RSRC1Q96IZ7 334 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 ALPK1Q96QP1 1244 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 PTDSS2Q9BVG9 487 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 TAPBPLQ9BX59 468 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 POTEKPQ9BYX7 375 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 POLR2J2Q9GZM3 115 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 POLR2J3Q9H1A7 115 aaKnown RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 PLEKHF2Q9H8W4 249 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 NMNAT1Q9HAN9 279 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 MAN2C1Q9NTJ4 1040 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 PAQR5Q9NXK6 330 aaPredicted RBP8.07□□□□□ -1.12
VCP-206ENST00000480327 KLHL13Q9P2N7 655 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 SEC14L4Q9UDX3 406 aa8.07□□□□□ -1.12
VCP-206ENST00000480327 TLN2Q9Y4G6 2542 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 TRAV36DV7A0A075B6V5 113 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 DHRS12A0PJE2 317 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MBD3L4A6NDZ8 208 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 MBD3L3A6NE82 208 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 MBD3L5A6NJ08 208 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 AQP12BA6NM10 295 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 HSPB2A8KAH6 182 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 ANKRD65E5RJM6 399 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 SMAD9O15198 467 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 RAMP1O60894 148 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 PRSS23O95084 383 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 PMS2P2O95744 297 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 CH25HO95992 272 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 PLGP00747 810 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 IL2RAP01589 272 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 GPIP06744 558 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 H1F0P07305 194 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 TMIGD3P0DMS9 266 aaPredicted RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 FOSL1P15407 271 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 ITGA2P17301 1181 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 RHCEP18577 417 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 DNASE1P24855 282 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 GTF2E2P29084 291 aaKnown RBP8.06□□□□□ -1.12
VCP-206ENST00000480327 GRPRP30550 384 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 HOXC12P31275 282 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 ASCL1P50553 236 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 MAP2K6P52564 334 aa8.06□□□□□ -1.12
VCP-206ENST00000480327 SLC35A1P78382 337 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms