RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FAM183AA6NL82 134 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 LRRN3E7EW58 273 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 SNPHO15079 494 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 AIREO43918 545 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 BCL10O95999 233 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 IGHMP01871 453 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 LIMS3P0CW19 117 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 LIMS4P0CW20 117 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 HIST1H1CP16403 213 aaKnown RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 PAX7P23759 505 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ATP6V1E1P36543 226 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 AQP2P41181 271 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 RPS5P46782 204 aaKnown RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ETV1P50549 477 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 TUBA1BP68363 451 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 BDH1Q02338 343 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 RPL18Q07020 188 aaKnown RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ZP4Q12836 540 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.812e-7■□□□□ 9.3
VTI1A-204ENST00000480057 GLYR1Q49A26 553 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 SLC22A10Q63ZE4 541 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 TUBA1AQ71U36 451 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ADCK1Q86TW2 530 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 PLCZ1Q86YW0 608 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 EGFL6Q8IUX8 553 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 KLHL36Q8N4N3 616 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 TMEM156Q8N614 296 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ACBD7Q8N6N7 88 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 AMER2Q8N7J2 671 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 NPEPL1Q8NDH3 523 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ADPRHL1Q8NDY3 354 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 BBS1Q8NFJ9 593 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 OR4K17Q8NGC6 315 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 ADAMTS17Q8TE56 1095 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 SLC25A43Q8WUT9 341 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 C1GALT1C1Q96EU7 318 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 DTNBP1Q96EV8 351 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 TMEM41AQ96HV5 264 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 OR5M11Q96RB7 305 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 KATNB1Q9BVA0 655 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 SIAEQ9HAT2 523 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 FANCFQ9NPI8 374 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 TAS2R16Q9NYV7 291 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 SEC14L4Q9UDX3 406 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 CLEC2DQ9UHP7 191 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 MOKQ9UQ07 419 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 CAB39Q9Y376 341 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-204ENST00000480057 PCDHGB7Q9Y5F8 929 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 CACNA1HO95180 2353 aa9.97□□□□□ -0.81
VTI1A-204ENST00000480057 VCANP13611 3396 aa9.96□□□□□ -0.81
VTI1A-204ENST00000480057 A0A1W2PPW3 197 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ZC3H12DA2A288 527 aaKnown RBP9.96□□□□□ -0.82
VTI1A-204ENST00000480057 C17orf51A8MQB3 221 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 B4DXG7 233 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 FTCDNL1E5RQL4 147 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 PROB1E7EW31 1015 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 BLOC1S5-TXNDC5H3BN57 136 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 GMFGO60234 142 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 TRIM3O75382 744 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-204ENST00000480057 SBK2P0C263 348 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 CPEP16870 476 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 CENPAP49450 140 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 DIO1P49895 249 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 CTXN1P60606 82 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ERVK-25P63136 954 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 Q0VFX4 171 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 FOXF1Q12946 379 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 SELENBP1Q13228 472 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 AQP6Q13520 282 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 TPBGQ13641 420 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 PON3Q15166 354 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 TSTQ16762 297 aaKnown RBP9.96□□□□□ -0.82
VTI1A-204ENST00000480057 BICRALQ6AI39 1079 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 C3orf33Q6P1S2 294 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 IL20RBQ6UXL0 311 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 TMPRSS11AQ6ZMR5 421 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 JAZF1Q86VZ6 243 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ATCAYQ86WG3 371 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 WDSUB1Q8N9V3 476 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 KBTBD8Q8NFY9 601 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 OR4K13Q8NH42 304 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 OTULINQ96BN8 352 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ARHGAP9Q9BRR9 750 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF649Q9BS31 505 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 HCAR1Q9BXC0 346 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 INIPQ9NRY2 104 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 SACM1LQ9NTJ5 587 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 NDUFB11Q9NX14 153 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 ERVK13-1Q9NX77 482 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 TAS2R5Q9NYW4 299 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 GRHPRQ9UBQ7 328 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 NOX1Q9Y5S8 564 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 OTOGLQ3ZCN5 2332 aa9.96□□□□□ -0.82
VTI1A-204ENST00000480057 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 TEX13CA0A0J9YWL9 993 aa9.95□□□□□ -0.82
VTI1A-204ENST00000480057 LOC101059948A0A1B0GTJ6 334 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms