RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	FBXO27	Q8NI29	283 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FNDC9	Q8TBE3	224 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	ST8SIA1	Q92185	356 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZG16B	Q96DA0	208 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	LRGUK	Q96M69	825 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	NSMCE2	Q96MF7	247 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	NGB	Q9NPG2	151 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	FLRT3	Q9NZU0	649 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	KCNE5	Q9UJ90	142 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	KCNS2	Q9ULS6	477 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	CARD8	Q9Y2G2	431 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	EMC9	Q9Y3B6	208 aa		13.8	□□□□□ -0.2
HDLBP-238	ENST00000479894	C7orf72	A4D263	438 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	CLOCK	O15516	846 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	CD8A	P01732	235 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	IGHV4-31	P0DP07	118 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF16	P17020	682 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	HNF1A	P20823	631 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	IGFBP5	P24593	272 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ADH6	P28332	368 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	CCR4	P51679	360 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	MAP2K6	P52564	334 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	NUDT6	P53370	316 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	SELENOW	P63302	87 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF117	Q03924	483 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	SKP2	Q13309	424 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	PON3	Q15166	354 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	CD226	Q15762	336 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	LRRC23	Q53EV4	343 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	CYBRD1	Q53TN4	286 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	DHFR2	Q86XF0	187 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	VRK2	Q86Y07	508 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	C10orf67	Q8IYJ2	551 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	GATS	Q8NAP1	163 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	SGMS2	Q8NHU3	365 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ASB9	Q96DX5	294 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	C1GALT1C1	Q96EU7	318 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	TRIM2	Q9C040	744 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	QRSL1	Q9H0R6	528 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAIM	Q9NVQ4	179 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	SELENON	Q9NZV5	590 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	MED11	Q9P086	117 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ACTR3B	Q9P1U1	418 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	ICAM5	Q9UMF0	924 aa		13.79	□□□□□ -0.2
HDLBP-238	ENST00000479894	GSC2	O15499	205 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	FMO6P	O60774	539 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF17	P17021	662 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	HK1	P19367	917 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	TCN1	P20061	433 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	GZMK	P49863	264 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	RPS3A	P61247	264 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	CEACAM7	Q14002	265 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	FAM120AOS	Q5T036	256 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	OR5M10	Q6IEU7	315 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF836	Q6ZNA1	936 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	RNF148	Q8N7C7	305 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	STEAP2	Q8NFT2	490 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	ZNF563	Q8TA94	476 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	MRGPRX4	Q96LA9	322 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	ADAD1	Q96M93	576 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	POLR2J2	Q9GZM3	115 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	POLR2J3	Q9H1A7	115 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	SERINC1	Q9NRX5	453 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	RPS6KB2	Q9UBS0	482 aa		13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	TES	Q9UGI8	421 aa	Known RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	SPIN1	Q9Y657	262 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-238	ENST00000479894	GJE1	A6NN92	205 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	TCF21	O43680	179 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	CIB2	O75838	187 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	ZNF682	O95780	498 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	LGI1	O95970	557 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	SUCLG1	P53597	346 aa	Known RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	RGS8	P57771	180 aa	Predicted RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	FAM166A	Q6J272	317 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	FKBP9P1	Q75LS8	142 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	CBLL1	Q75N03	491 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	OLIG3	Q7RTU3	272 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	STK32C	Q86UX6	486 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	GPR119	Q8TDV5	335 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	GEMIN6	Q8WXD5	167 aa	Known RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	CNOT9	Q92600	299 aa	Known RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	NEUROG1	Q92886	237 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	TAMM41	Q96BW9	452 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	HDHD5	Q9BXW7	423 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	TMEM27	Q9HBJ8	222 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	DCAF13	Q9NV06	445 aa	Known RBP	13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	EGFL7	Q9UHF1	273 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	B3GALT5	Q9Y2C3	310 aa		13.77	□□□□□ -0.21
HDLBP-238	ENST00000479894	PKD1L1	Q8TDX9	2849 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	AP3D1	O14617	1153 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	ARPC2	O15144	300 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	SS18L1	O75177	396 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	GCM2	O75603	506 aa	Predicted RBP	13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	SERPINA1	P01009	418 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	ITGA2	P17301	1181 aa		13.76	□□□□□ -0.21
HDLBP-238	ENST00000479894	EGR1	P18146	543 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms