RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ZNF836Q6ZNA1 936 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 LSRQ86X29 649 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-218ENST00000479554 VRK2Q86Y07 508 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 OR52N5Q8NH56 324 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 OR52P1PQ8NH57 321 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 STMN2Q93045 179 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 LRRC58Q96CX6 371 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ITCHQ96J02 903 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 ALG2Q9H553 416 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 TPT1P8Q9HAU6 139 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 CACYBPQ9HB71 228 aaKnown RBP12.63□□□□□ -0.39
ATG4B-218ENST00000479554 FAIMQ9NVQ4 179 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 RLIMQ9NVW2 624 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 MALT1Q9UDY8 824 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 POMPQ9Y244 141 aa12.63□□□□□ -0.39
ATG4B-218ENST00000479554 DSPPQ9NZW4 1301 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 USF3Q68DE3 2245 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 TMEM247A6NEH6 219 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 SHISA9B4DS77 424 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 ENTPD5O75356 428 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CXCR1P25024 350 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 IDUAP35475 653 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CEACAM7Q14002 265 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CLEC12BQ2HXU8 276 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 GTDC1Q4AE62 458 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 PAGE3Q5JUK9 113 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 RNF220Q5VTB9 566 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 PAQR6Q6TCH4 344 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 TMEM108Q6UXF1 575 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 PIAS4Q8N2W9 510 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 ADAM19Q9H013 955 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 PARPBPQ9NWS1 579 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 THUMPD1Q9NXG2 353 aaKnown RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 UPB1Q9UBR1 384 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 ZNF443Q9Y2A4 671 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-218ENST00000479554 FLVCR1Q9Y5Y0 555 aa12.62□□□□□ -0.39
ATG4B-218ENST00000479554 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 FXYD1O00168 92 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 GPIP06744 558 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 THBS1P07996 1170 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 ITGA5P08648 1049 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 PCSK6P29122 969 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 NTF4P34130 210 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 ZNF83P51522 516 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 SLC7A2P52569 658 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 COPZ1P61923 177 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 PPP2R2BQ00005 443 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 TNK1Q13470 666 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 SLC17A1Q14916 467 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 ZSWIM7Q19AV6 140 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 RPS26P11Q5JNZ5 115 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 OTUD3Q5T2D3 398 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 OR7E24Q6IFN5 339 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 SLC2A7Q6PXP3 512 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 DHDDSQ86SQ9 333 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 OR52E4Q8NGH9 312 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 SLC38A5Q8WUX1 472 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 CCDC124Q96CT7 223 aaKnown RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 TMEM19Q96HH6 336 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 RADILQ96JH8 1075 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 TRAF4Q9BUZ4 470 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-218ENST00000479554 DCLRE1BQ9H816 532 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 ABCD2Q9UBJ2 740 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 POU2F3Q9UKI9 436 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 MGAT4BQ9UQ53 548 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 SLC25A15Q9Y619 301 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 ABCA2Q9BZC7 2435 aa12.61□□□□□ -0.39
ATG4B-218ENST00000479554 TLN2Q9Y4G6 2542 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 A0A0G2JPF8 293 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 A0A1W2PR80 420 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 HNRNPCL2B2RXH8 293 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 HNRNPCL3B7ZW38 293 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 FKBP6O75344 327 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 TFPTP0C1Z6 253 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 HNRNPCL4P0DMR1 293 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 SLC6A2P23975 617 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 PTAFRP25105 342 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 FOXG1P55316 489 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-218ENST00000479554 TRAP1Q12931 704 aaKnown RBP12.6□□□□□ -0.39
ATG4B-218ENST00000479554 OR7A5Q15622 319 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 GABRA6Q16445 453 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 HS6ST2Q96MM7 605 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 TAPBPLQ9BX59 468 aa12.6□□□□□ -0.39
ATG4B-218ENST00000479554 SLCO5A1Q9H2Y9 848 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms