RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SERTAD3Q9UJW9 196 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 MMP17Q9ULZ9 603 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 LRP4O75096 1905 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 IGHV5-51A0A0C4DH38 117 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 SERINC4A6NH21 518 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 PIN1P1O15428 100 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CTNSO60931 367 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 SDC3O75056 442 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TCRBP04435 133 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 RNH1P13489 461 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 SPI1P17947 270 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CFL1P23528 166 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 EDNRAP25101 427 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 RBMS1P29558 406 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 SIRPAP78324 504 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CAMK2BQ13554 666 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ARHGAP11AQ6P4F7 1023 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 GPALPP1Q8IXQ4 340 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 OR51Q1Q8NH59 317 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CEP76Q8TAP6 659 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 LGALS14Q8TCE9 139 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 FOXN4Q96NZ1 517 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TGM7Q96PF1 710 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 CNN2Q99439 309 aaKnown RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 GFI1Q99684 422 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 NKX3-1Q99801 234 aaPredicted RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 GON7Q9BXV9 100 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 TSPAN10Q9H1Z9 355 aaPredicted RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 C14orf105Q9NVL8 296 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ANKRD10Q9NXR5 420 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 NCDNQ9UBB6 729 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 ING1Q9UK53 422 aaPredicted RBP9.88□□□□□ -0.83
VPS52-217ENST00000478934 ICAM5Q9UMF0 924 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 KLHDC2Q9Y2U9 406 aa9.88□□□□□ -0.83
VPS52-217ENST00000478934 PCNX3Q9H6A9 2034 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 IFNGP01579 166 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 CLPSP04118 112 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 EPXP11678 715 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 MST1P26927 711 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 OR1D4P47884 311 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 CDK5R1Q15078 307 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ZNF141Q15928 474 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 KIAA0895LQ68EN5 471 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 PRR23CQ6ZRP0 262 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 MED25Q71SY5 747 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 KANSL1Q7Z3B3 1105 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 GRAMD2AQ8IUY3 354 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 PRSS58Q8IYP2 241 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ZNF671Q8TAW3 534 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 UBL7Q96S82 380 aaPredicted RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 DDOQ99489 341 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 CACNG6Q9BXT2 260 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 Q9N2J8 555 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 NOX4Q9NPH5 578 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 MKKSQ9NPJ1 570 aaPredicted RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 PNO1Q9NRX1 252 aaKnown RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 A0A087WUJ7 227 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 TVP23AA6NH52 213 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 GMDSO60547 372 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 MYF5P13349 255 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 GALP22466 123 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 EFNA3P52797 238 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 LTBQ06643 244 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 PON3Q15166 354 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ST3GAL2Q16842 350 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 MANEAQ5SRI9 462 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 TIGD3Q6B0B8 471 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 LEG1Q6P5S2 330 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ZNF615Q8N8J6 731 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ZNF431Q8TF32 576 aaPredicted RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 TSLPQ969D9 159 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
VPS52-217ENST00000478934 SMIM19Q96E16 107 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 NIPAL2Q9H841 368 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 ZFP64Q9NPA5 681 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 INPP5EQ9NRR6 644 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 HAO2Q9NYQ3 351 aa9.87□□□□□ -0.83
VPS52-217ENST00000478934 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.86□□□□□ -0.83
VPS52-217ENST00000478934 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.86□□□□□ -0.83
VPS52-217ENST00000478934 RPS15P62841 145 aaKnown RBP9.86□□□□□ -0.83
VPS52-217ENST00000478934 HYAL4Q2M3T9 481 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 FAM209AQ5JX71 171 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 C1QL3Q5VWW1 255 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 LINGO2Q7L985 606 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 PHOSPHO1Q8TCT1 267 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 RGP1Q92546 391 aaPredicted RBP9.86□□□□□ -0.83
VPS52-217ENST00000478934 KLHDC7BQ96G42 594 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 GTPBP2Q9BX10 602 aaKnown RBP9.86□□□□□ -0.83
VPS52-217ENST00000478934 GHITMQ9H3K2 345 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 POLE3Q9NRF9 147 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 SOHLH2Q9NX45 425 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 OGG1O15527 345 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 FLRT2O43155 660 aa9.86□□□□□ -0.83
VPS52-217ENST00000478934 HPXP02790 462 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms