RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 GAAP10253 952 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 SAGP10523 405 aaPredicted RBP14.81□□□□□ -0.04
VIM-204ENST00000478746 COL8A2P25067 703 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 CRHR1P34998 444 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 DAG1Q14118 895 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 SLC9B1Q4ZJI4 515 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 ATP6AP1LQ52LC2 224 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 ELFN2Q5R3F8 820 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 FRRS1Q6ZNA5 592 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 CREB3L2Q70SY1 520 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 LINGO2Q7L985 606 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 MYPOPQ86VE0 399 aaPredicted RBP14.81□□□□□ -0.04
VIM-204ENST00000478746 CARM1Q86X55 608 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 RIMKLAQ8IXN7 391 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 CLECL1Q8IZS7 167 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 MIPOL1Q8TD10 442 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 RAB8BQ92930 207 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 ZNF747Q9BV97 191 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 SUCNR1Q9BXA5 334 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 RACGAP1Q9H0H5 632 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 REV1Q9UBZ9 1251 aa14.81□□□□□ -0.04
VIM-204ENST00000478746 TRAV20A0A0B4J274 112 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 SYNGR3O43761 229 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 TRIM13O60858 407 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 UPK3AO75631 287 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 PNPP00491 289 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 CXCR1P25024 350 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 POU3F1Q03052 451 aaPredicted RBP14.8□□□□□ -0.04
VIM-204ENST00000478746 PLAURQ03405 335 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 GPAT3Q53EU6 434 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 C6orf136Q5SQH8 315 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 NIPAL3Q6P499 406 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 TNFAIP8L2Q6P589 184 aaPredicted RBP14.8□□□□□ -0.04
VIM-204ENST00000478746 SHISA2Q6UWI4 295 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 C1orf229Q6ZS94 237 aaPredicted RBP14.8□□□□□ -0.04
VIM-204ENST00000478746 FNDC5Q8NAU1 212 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 IL17RDQ8NFM7 739 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 RDH5Q92781 318 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 NELFAQ9H3P2 528 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 MS4A5Q9H3V2 200 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 CRLF2Q9HC73 371 aa14.8□□□□□ -0.04
VIM-204ENST00000478746 TMEM229AB2RXF0 380 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 WNT9BO14905 357 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 VAMP5O95183 116 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 CHRNGP07510 517 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 TCN1P20061 433 aaPredicted RBP14.79□□□□□ -0.04
VIM-204ENST00000478746 ACHEP22303 614 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 ARR3P36575 388 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 EVX1P49640 407 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 SH3BGRP55822 239 aaPredicted RBP14.79□□□□□ -0.04
VIM-204ENST00000478746 TMEM33P57088 247 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 ARF1P84077 181 aaKnown RBP14.79□□□□□ -0.04
VIM-204ENST00000478746 ROR2Q01974 943 aaKnown RBP14.79□□□□□ -0.04
VIM-204ENST00000478746 NPRL3Q12980 569 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 SNTB2Q13425 540 aaKnown RBP14.79□□□□□ -0.04
VIM-204ENST00000478746 OR4F3Q6IEY1 312 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 KRT80Q6KB66 452 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 CMIPQ8IY22 773 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 OR4A15Q8NGL6 344 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 C3orf30Q96M34 536 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 TAPBPLQ9BX59 468 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 LINC00470Q9BZP3 86 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 ADPRHL2Q9NX46 363 aa14.79□□□□□ -0.04
VIM-204ENST00000478746 LOC105371242A0A075B767 164 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 M0R233 179 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 FAAHO00519 579 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 COPEO14579 308 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 BCL10O95999 233 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 AVPP01185 164 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 HPXP02790 462 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 ANPEPP15144 967 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 LMO4P61968 165 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 HPCAP84074 193 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 MYBPC1Q00872 1141 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 FUT5Q11128 374 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 XKR7Q5GH72 579 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 ZCCHC23Q6ZST2 131 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 EPHX4Q8IUS5 362 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 AGR3Q8TD06 166 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 MRPL37Q9BZE1 423 aaKnown RBP14.78□□□□□ -0.04
VIM-204ENST00000478746 NOX3Q9HBY0 568 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 MID2Q9UJV3 735 aa14.78□□□□□ -0.04
VIM-204ENST00000478746 TRRAPQ9Y4A5 3859 aa14.77□□□□□ -0.04
VIM-204ENST00000478746 CFAP73A6NFT4 308 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 RNASET2O00584 256 aaKnown RBP14.77□□□□□ -0.05
VIM-204ENST00000478746 PPIHO43447 177 aaKnown RBP14.77□□□□□ -0.05
VIM-204ENST00000478746 FAM153BP0C7A2 387 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 G6PDP11413 515 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 UQCRBP14927 111 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 UQCRC2P22695 453 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 NR4A1P22736 598 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 P2RY4P51582 365 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 FOXL1Q12952 345 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 PCLAFQ15004 111 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 GSTA3Q16772 222 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 ZNF311Q5JNZ3 666 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 REP15Q6BDI9 236 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 ANKK1Q8NFD2 765 aa14.77□□□□□ -0.05
VIM-204ENST00000478746 MRPL24Q96A35 216 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms