RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SLC35B4Q969S0 331 aa12.92□□□□□ -0.34
USP11-207ENST00000478596 ZBTB8AQ96BR9 441 aa12.92□□□□□ -0.34
USP11-207ENST00000478596 TRMT61AQ96FX7 289 aaKnown RBP12.92□□□□□ -0.34
USP11-207ENST00000478596 UCN2Q96RP3 112 aa12.92□□□□□ -0.34
USP11-207ENST00000478596 SHARPINQ9H0F6 387 aa12.92□□□□□ -0.34
USP11-207ENST00000478596 YY1AP1Q9H869 796 aa12.92□□□□□ -0.34
USP11-207ENST00000478596 A0A0G2JK05 382 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 TCRBV5S2A0A599 114 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 EGR1P18146 543 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 CCNA2P20248 432 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 CCKARP32238 428 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 CD79BP40259 229 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 RPS4XP62701 263 aaKnown RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 SPIBQ01892 262 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 PLAURQ03405 335 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 CCNIQ14094 377 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 FGD3Q5JSP0 725 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ENTPD8Q5MY95 495 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 DCST1Q5T197 706 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 LIPNQ5VXI9 398 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 AP1ARQ63HQ0 302 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ZNF704Q6ZNC4 412 aaPredicted RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 ADGRE4PQ86SQ3 457 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 RBM45Q8IUH3 476 aaKnown RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 C10orf67Q8IYJ2 551 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ATP6V1C2Q8NEY4 427 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 OR5M1Q8NGP8 315 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 GPR119Q8TDV5 335 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 ST8SIA1Q92185 356 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 INTS12Q96CB8 462 aaKnown RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 PRRC1Q96M27 445 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 FNDC11Q9BVV2 318 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 SLCO5A1Q9H2Y9 848 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 UBQLN3Q9H347 655 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 MAGIXQ9H6Y5 334 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 CHST2Q9Y4C5 530 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
USP11-207ENST00000478596 DOCK7Q96N67 2140 aa12.91□□□□□ -0.34
USP11-207ENST00000478596 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 H3BML4 177 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 GNGT2O14610 69 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 HS3ST1O14792 307 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 GPRIN2O60269 458 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 TNFSF13O75888 250 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 RAP2AP10114 183 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 UMPSP11172 480 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 ZNF17P17021 662 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 PRKCAP17252 672 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 HOXB6P17509 224 aaKnown RBP12.9□□□□□ -0.34
USP11-207ENST00000478596 SRD5A1P18405 259 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 CXCR1P25024 350 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 UGT2B10P36537 528 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 ACVR1BP36896 505 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 EIF1P41567 113 aaKnown RBP12.9□□□□□ -0.34
USP11-207ENST00000478596 HTR3AP46098 478 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 POLR2HP52434 150 aaKnown RBP12.9□□□□□ -0.34
USP11-207ENST00000478596 SESN3P58005 492 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 OR1Q1Q15612 314 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 TOMM34Q15785 309 aaPredicted RBP12.9□□□□□ -0.34
USP11-207ENST00000478596 ALG10BQ5I7T1 473 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 AAGABQ6PD74 315 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 ADGRG5Q8IZF4 528 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 SGMS2Q8NHU3 365 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 WNT2BQ93097 391 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.34
USP11-207ENST00000478596 TMEM185BQ9H7F4 350 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 SLC7A7Q9UM01 511 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.34
USP11-207ENST00000478596 A0A1B0GWA3 101 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TCRBV3S1A0A5B6 114 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TRAPPC13A5PLN9 417 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 FAAHO00519 579 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TPST2O60704 377 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 FMO6PO60774 539 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 DIRAS1O95057 198 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TFPIP10646 304 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 PEPDP12955 493 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 PTNP21246 168 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 HTR2AP28223 471 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TACR3P29371 465 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 SLC1A3P43003 542 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 ACTR3P61158 418 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 VLDLRP98155 873 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 SELENBP1Q13228 472 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 NPTX1Q15818 432 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 C12orf54Q6X4T0 127 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
USP11-207ENST00000478596 ADAMTS16Q8TE57 1224 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms