RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 GFPT1Q06210 699 aaPredicted RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 PDIA5Q14554 519 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 SMU1Q2TAY7 513 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 LCN12Q6JVE5 192 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 TPRA1Q86W33 373 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 SNX32Q86XE0 403 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 KIR3DL3Q8N743 410 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 TMEM104Q8NE00 496 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 C1orf64Q8NEQ6 169 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 OR10G4Q8NGN3 311 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 PNPT1Q8TCS8 783 aaKnown RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 NCLNQ969V3 563 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 WFIKKN1Q96NZ8 548 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 ECSITQ9BQ95 431 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 TBCDQ9BTW9 1192 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 ANGPTL4Q9BY76 406 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 SMYD3Q9H7B4 428 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 ZWILCHQ9H900 591 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 COMMD8Q9NX08 183 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 TRIM10Q9UDY6 481 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 CD84Q9UIB8 345 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 STAP1Q9ULZ2 295 aa0.69□□□□□ -2.3
HPS3-205ENST00000478525 PRRC2BQ5JSZ5 2229 aaKnown RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 DHX29Q7Z478 1369 aaKnown RBP0.69□□□□□ -2.3
HPS3-205ENST00000478525 TRBV2A0A0J9YWF9 115 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 CCNE2O96020 404 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 OPN1LWP04000 364 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 IGF1P05019 195 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 IGHV3-43DP0DP04 118 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 RALAP11233 206 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 ABOP16442 354 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 FGF9P31371 208 aaPredicted RBP0.68□□□□□ -2.3
HPS3-205ENST00000478525 AKT2P31751 481 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 CX3CR1P49238 355 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 HSPA2P54652 639 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 COA6Q5JTJ3 125 aaKnown RBP0.68□□□□□ -2.3
HPS3-205ENST00000478525 CES3Q6UWW8 571 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 UNQ9165/PRO28630Q6UXU0 137 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 SYT10Q6XYQ8 523 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 Q6ZN92 141 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 GET4Q7L5D6 327 aaPredicted RBP0.68□□□□□ -2.3
HPS3-205ENST00000478525 NLRP9Q7RTR0 991 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 SLC26A11Q86WA9 606 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 TMEM17Q86X19 198 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 CNNM3Q8NE01 707 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 OR1N2Q8NGR9 330 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 PSMA8Q8TAA3 256 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 PAGE5Q96GU1 130 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 VSTM2LQ96N03 204 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 ALG12Q9BV10 488 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 RHBGQ9H310 441 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 RHOJQ9H4E5 214 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 RNF167Q9H6Y7 350 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 NUDT15Q9NV35 164 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 GPATCH2LQ9NWQ4 482 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 SVILO95425 2214 aa0.68□□□□□ -2.3
HPS3-205ENST00000478525 C12orf71A8MTZ7 269 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 HMGB1P1B2RPK0 211 aaPredicted RBP0.67□□□□□ -2.3
HPS3-205ENST00000478525 C12orf77C9JDV5 145 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 H0YHG0 523 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 IGLV6-57P01721 117 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 ASPHQ12797 758 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 SPP2Q13103 211 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 TRIM16LQ309B1 348 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 TTLL9Q3SXZ7 439 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 PARP15Q460N3 678 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 SPINT4Q6UDR6 99 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 KDM7AQ6ZMT4 941 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 GMCL1P1Q8NEA9 526 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 OR5AU1Q8NGC0 362 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 OR5L2Q8NGL0 311 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 NANPQ8TBE9 248 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 DQX1Q8TE96 717 aaKnown RBP0.67□□□□□ -2.3
HPS3-205ENST00000478525 MRPS31Q92665 395 aaKnown RBP0.67□□□□□ -2.3
HPS3-205ENST00000478525 EEF2KMTQ96G04 330 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 AURKBQ96GD4 344 aaPredicted RBP0.67□□□□□ -2.3
HPS3-205ENST00000478525 TM2D3Q9BRN9 247 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 HMG20AQ9NP66 347 aa0.67□□□□□ -2.3
HPS3-205ENST00000478525 CNOT2Q9NZN8 540 aaKnown RBP0.67□□□□□ -2.3
HPS3-205ENST00000478525 A0A1B0GUS0 222 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 B3GAT3O94766 335 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 CA1P00915 261 aaPredicted RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 NPR2P20594 1047 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 RFC4P35249 363 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 SLC11A1P49279 550 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 DAP3P51398 398 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 RPS14P62263 151 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 PLD1Q13393 1074 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 NCCRP1Q6ZVX7 275 aaPredicted RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 OR4K14Q8NGD5 310 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 NARS2Q96I59 477 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 ITCHQ96J02 903 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 JAKMIP1Q96N16 626 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 POLR1EQ9GZS1 481 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 AATFQ9NY61 560 aaKnown RBP eCLIP0.66□□□□□ -2.3
HPS3-205ENST00000478525 DNPEPQ9ULA0 475 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 TDRKHQ9Y2W6 561 aaKnown RBP0.66□□□□□ -2.3
HPS3-205ENST00000478525 ALG6Q9Y672 507 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 BAHCC1Q9P281 2608 aa0.66□□□□□ -2.3
HPS3-205ENST00000478525 NSG1A0A0A6YYJ2 146 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms