RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ALDH3A1P30838 453 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 CLDN17P56750 224 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 COPZ1P61923 177 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 H3F3AP84243 136 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 FUT5Q11128 374 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 MAD2L1Q13257 205 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 GNA13Q14344 377 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 PDCD2Q16342 344 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SYPL1Q16563 259 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ZSWIM7Q19AV6 140 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ALKBH6Q3KRA9 238 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 XKR7Q5GH72 579 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SWT1Q5T5J6 900 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 MRPL2Q5T653 305 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ATG16L1Q676U5 607 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 RNF165Q6ZSG1 346 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF771Q7L3S4 317 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 PEG10Q86TG7 708 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 MYPOPQ86VE0 399 aaPredicted RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 KDM8Q8N371 416 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF786Q8N393 782 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 GPR137CQ8N3F9 429 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 FAM71CQ8NEG0 241 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 VPS37AQ8NEZ2 397 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SEMA6DQ8NFY4 1073 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 KIF18AQ8NI77 898 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 PNPT1Q8TCS8 783 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 TMEM186Q96B77 213 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SLC25A36Q96CQ1 311 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 ZG16BQ96DA0 208 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 LRRC37BQ96QE4 947 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SYT3Q9BQG1 590 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SLC35A5Q9BS91 424 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 SF3B5Q9BWJ5 86 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 CACYBPQ9HB71 228 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 EXOSC3Q9NQT5 275 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 POLE3Q9NRF9 147 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 TREM2Q9NZC2 230 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 NOP53Q9NZM5 478 aaKnown RBP5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 CMAHPQ9Y471 501 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 NOX1Q9Y5S8 564 aa5.78□□□□□ -1.48
RTFDC1-206ENST00000477485 LOC105371242A0A075B767 164 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ARPC4-TTLL3A0A0A6YYG9 625 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 IGHV2OR16-5A0A0B4J2B6 119 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 A0A1W2PPW3 197 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 LIPT2A6NK58 231 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 FAM157AC9JC47 383 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RNASET2O00584 256 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 SLC43A1O75387 559 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 SPAG7O75391 227 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 AHSA1O95433 338 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 MSMBP08118 114 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 FGF4P08620 206 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 GKN3PP0CG01 181 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 NR2F1P10589 423 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CD79AP11912 226 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ZNF43P17038 809 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 PAX7P23759 505 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ALDH3B1P43353 468 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ANXA11P50995 505 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 SH3BGRP55822 239 aaPredicted RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 NME5P56597 212 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CLDN8P56748 225 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ARF1P84077 181 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 GALK2Q01415 458 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 HGFACQ04756 655 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RIN1Q13671 783 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 C1DQ13901 141 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 MAD2L1BPQ15013 274 aaPredicted RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 UGT3A2Q3SY77 523 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 C1QTNF12Q5T7M4 302 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 GKAP1Q5VSY0 366 aaPredicted RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CARD17Q5XLA6 110 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 LINGO2Q7L985 606 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 MDP1Q86V88 176 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CARM1Q86X55 608 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RNF130Q86XS8 419 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 HOMEZQ8IX15 550 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RIMKLAQ8IXN7 391 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 PEX5LQ8IYB4 626 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CNPY4Q8N129 248 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 BPIFB2Q8N4F0 458 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ANKFN1Q8N957 763 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ZIC4Q8N9L1 334 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 NUP37Q8NFH4 326 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 OR51F2Q8NH61 342 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 CLDND2Q8NHS1 167 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RNF217Q8TC41 542 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 MGARPQ8TDB4 240 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ZFAND2BQ8WV99 257 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 BCL2L2Q92843 193 aaPredicted RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 APOPT1Q96IL0 206 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 JMJD8Q96S16 334 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 DOK1Q99704 481 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 RBM4Q9BWF3 364 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 ZNF442Q9H7R0 627 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 NOX3Q9HBY0 568 aa5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 MOV10Q9HCE1 1003 aaKnown RBP5.77□□□□□ -1.49
RTFDC1-206ENST00000477485 SLC17A7Q9P2U7 560 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms