RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MSMPQ1L6U9 139 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 FAM153CQ494X1 144 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 SLC9B1Q4ZJI4 515 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TREML4Q6UXN2 200 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 FRRS1Q6ZNA5 592 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 RIMKLAQ8IXN7 391 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 DDIASQ8IXT1 998 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 MIPOL1Q8TD10 442 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 TWIST2Q8WVJ9 160 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 CNOT9Q92600 299 aaKnown RBP9.78□□□□□ -0.84
BRCA1-213ENST00000476777 SLC35G5Q96KT7 338 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 PRPF18Q99633 342 aaKnown RBP9.78□□□□□ -0.84
BRCA1-213ENST00000476777 SLC6A7Q99884 636 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 SUCNR1Q9BXA5 334 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 OR51I1Q9H343 314 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 NOX3Q9HBY0 568 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 POLE3Q9NRF9 147 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-213ENST00000476777 EXD2Q9NVH0 621 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 REV1Q9UBZ9 1251 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 WDR45Q9Y484 360 aa9.78□□□□□ -0.84
BRCA1-213ENST00000476777 A0A1W2PPM1 405 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 PIP5K1BO14986 540 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 SYNGR3O43761 229 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 PEX11AO75192 247 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 OR12D1P0DN82 309 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 CPA3P15088 417 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 PRPS1L1P21108 318 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 NR4A1P22736 598 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 EVX1P49640 407 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 SH3BGRP55822 239 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 TMEM33P57088 247 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 UBA52P62987 128 aaKnown RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 FOXL1Q12952 345 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 NPRL3Q12980 569 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 DAG1Q14118 895 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 CCDC153Q494R4 210 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 MIDNQ504T8 468 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 TMEM225Q6GV28 225 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 KRT80Q6KB66 452 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 CREB3L2Q70SY1 520 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 C1QL2Q7Z5L3 287 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 EPHX4Q8IUS5 362 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 LRRC17Q8N6Y2 441 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 XAGE5Q8WWM1 108 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 RDH5Q92781 318 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 YIPF5Q969M3 257 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 MRPL24Q96A35 216 aaKnown RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 ROPN1LQ96C74 230 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 PPP3R2Q96LZ3 170 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 C1orf50Q9BV19 199 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 DUSP26Q9BV47 211 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 MRPL37Q9BZE1 423 aaKnown RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 LINC00470Q9BZP3 86 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 ZNF275Q9NSD4 429 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 PSMC3IPQ9P2W1 217 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-213ENST00000476777 CMAHPQ9Y471 501 aa9.77□□□□□ -0.85
BRCA1-213ENST00000476777 RNF103-CHMP3A0A140T963 221 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 PRAMEF27A3QJZ7 478 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 RPL36A-HNRNPH2H7BZ11 118 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 M0R233 179 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 FAAHO00519 579 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 AGR2O95994 175 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 BCL10O95999 233 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 FGF4P08620 206 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 HKR1P10072 659 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ARAFP10398 606 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ARR3P36575 388 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 MRPS11P82912 194 aaKnown RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ARF1P84077 181 aaKnown RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 MYBPC1Q00872 1141 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ROR2Q01974 943 aaKnown RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 XKR7Q5GH72 579 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 C6orf136Q5SQH8 315 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ATAD3BQ5T9A4 648 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 IL23RQ5VWK5 629 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 NIPAL3Q6P499 406 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 TNFAIP8L2Q6P589 184 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 C10orf107Q8IVU9 208 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 CLECL1Q8IZS7 167 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ANKK1Q8NFD2 765 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 IL17RDQ8NFM7 739 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 RAB8BQ92930 207 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 GATA5Q9BWX5 397 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-213ENST00000476777 TMPRSS13Q9BYE2 586 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 MS4A5Q9H3V2 200 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 CRLF2Q9HC73 371 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 SLC52A3Q9NQ40 469 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 ADPRHL2Q9NX46 363 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 TBK1Q9UHD2 729 aa9.76□□□□□ -0.85
BRCA1-213ENST00000476777 RIPK2O43353 540 aa9.75□□□□□ -0.85
BRCA1-213ENST00000476777 PPIHO43447 177 aaKnown RBP9.75□□□□□ -0.85
BRCA1-213ENST00000476777 SCN2BO60939 215 aa9.75□□□□□ -0.85
BRCA1-213ENST00000476777 RP2O75695 350 aa9.75□□□□□ -0.85
BRCA1-213ENST00000476777 NCR1O76036 304 aa9.75□□□□□ -0.85
BRCA1-213ENST00000476777 VAMP5O95183 116 aa9.75□□□□□ -0.85
BRCA1-213ENST00000476777 GSNP06396 782 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms