RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ZNF611Q8N823 705 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 MFSD8Q8NHS3 518 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 DNAJA4Q8WW22 397 aaPredicted RBP10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.83e-6■■■■□ 20.3
NUDCD3-206ENST00000475952 SLC38A4Q969I6 547 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 FBXW5Q969U6 566 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 CXorf56Q9H5V9 222 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 FGFR1OP2Q9NVK5 253 aa10.04□□□□□ -0.8
NUDCD3-206ENST00000475952 A0A1B0GWA3 101 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 OR2T1O43869 369 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 VIMP08670 466 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 HTR2AP28223 471 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 NTF4P34130 210 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 RPS5P46782 204 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 PCBP3P57721 371 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 TGFBR3Q03167 851 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 ADRM1Q16186 407 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 TRMT5Q32P41 509 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 MMEL1Q495T6 779 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 GLIPR1L2Q4G1C9 344 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 FAM69AQ5T7M9 428 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 INTS11Q5TA45 600 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 ADAM5Q6NVV9 412 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 ULK3Q6PHR2 472 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 KLHL17Q6TDP4 642 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 SEZ6L2Q6UXD5 910 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 AAED1Q7RTV5 226 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 LSRQ86X29 649 aaPredicted RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 C17orf78Q8N4C9 275 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 POMGNT2Q8NAT1 580 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 RNF217Q8TC41 542 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 SLC25A36Q96CQ1 311 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 SLC47A1Q96FL8 570 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 PERPQ96FX8 193 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 GSX2Q9BZM3 304 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 SLCO5A1Q9H2Y9 848 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 TMEM27Q9HBJ8 222 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 ZNF446Q9NWS9 450 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
NUDCD3-206ENST00000475952 A0A0B4J2E0 115 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 A0A1B0GX12 115 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 OR6C65A6NJZ3 312 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 BBIP1A8MTZ0 92 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 FTCDNL1E5RQL4 147 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PDLIM1O00151 329 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 AIM2O14862 343 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 TPST1O60507 370 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 KRT33AO76009 404 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 MFN2O95140 757 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 LY6G6DO95868 133 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 ITGA5P08648 1049 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PCSK6P29122 969 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PTH2RP49190 550 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 EGR4Q05215 589 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 CYLC2Q14093 348 aaPredicted RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 SELPLGQ14242 412 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 MFSD13AQ14CX5 517 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 GABRA6Q16445 453 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 COQ5Q5HYK3 327 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 C1QTNF12Q5T7M4 302 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 TSPO2Q5TGU0 170 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PRSS57Q6UWY2 283 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 TMEM108Q6UXF1 575 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PATL1Q86TB9 770 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 COMTD1Q86VU5 262 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PTOV1Q86YD1 416 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 SMYD1Q8NB12 490 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 KBTBD8Q8NFY9 601 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 OR52N5Q8NH56 324 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 RADILQ96JH8 1075 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF385AQ96PM9 386 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 EPYCQ99645 322 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 SH3GL1Q99961 368 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 PTDSS2Q9BVG9 487 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 KAT8Q9H7Z6 458 aaKnown RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 SLC7A10Q9NS82 523 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 FAIMQ9NVQ4 179 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 NPAP1Q9NZP6 1156 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 MGAT4BQ9UQ53 548 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 AMDHD2Q9Y303 409 aa10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 MAGED1Q9Y5V3 778 aaPredicted RBP10.02□□□□□ -0.81
NUDCD3-206ENST00000475952 TRAV36DV7A0A075B6V5 113 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 DPRXA6NFQ7 191 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF587BE7ETH6 402 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ABCD4O14678 606 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 AKAP8O43823 692 aaKnown RBP10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 OPN1SWP03999 348 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 C8BP07358 591 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 ZNF43P17038 809 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 PTAFRP25105 342 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 MPGP29372 298 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 PCGF2P35227 344 aa10.01□□□□□ -0.81
NUDCD3-206ENST00000475952 P2RY4P51582 365 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms