RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TP53BP2Q13625 1128 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 ZSCAN26Q16670 478 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 SPDYE7PQ495Y7 208 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 C8orf82Q6P1X6 216 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 C16orf89Q6UX73 402 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 OLIG3Q7RTU3 272 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 ARPINQ7Z6K5 226 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 LSRQ86X29 649 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 CLEC4FQ8N1N0 589 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 OR56A1Q8NGH5 318 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 ZNF524Q96C55 264 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 LRRC58Q96CX6 371 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 CGREF1Q99674 301 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 HOPXQ9BPY8 73 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 BTBD2Q9BX70 525 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 C1orf21Q9H246 121 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 TAS2R16Q9NYV7 291 aa12.17□□□□□ -0.46
FAM3A-218ENST00000475657 FBXO9Q9UK97 447 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 GPC6Q9Y625 555 aaPredicted RBP12.17□□□□□ -0.46
FAM3A-218ENST00000475657 IGHV3-15A0A0B4J1V0 119 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 A0A1W2PQD3 144 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 B2RBV5 119 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 B4DSR2 109 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 GSNP06396 782 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 PPIBP23284 216 aaKnown RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 MAGEA8P43361 318 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 CCT3P49368 545 aaKnown RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 MXRA7P84157 204 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 GABRA6Q16445 453 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 GTDC1Q4AE62 458 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 EXOSC6Q5RKV6 272 aaKnown RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 ZNF621Q6ZSS3 439 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 MSRB3Q8IXL7 192 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 PGAM4Q8N0Y7 254 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 ZNF614Q8N883 585 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 RBM15BQ8NDT2 890 aaKnown RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 OR8J3Q8NGG0 315 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 OR5AK3PQ8NH89 298 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 FBXO27Q8NI29 283 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 ZNF300Q96RE9 604 aaPredicted RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 VRK1Q99986 396 aaPredicted RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SLC6A13Q9NSD5 602 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SLC25A37Q9NYZ2 338 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.16□□□□□ -0.46
FAM3A-218ENST00000475657 SPEF1Q9Y4P9 236 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 PCDHB14Q9Y5E9 798 aa12.16□□□□□ -0.46
FAM3A-218ENST00000475657 IGKV3D-15A0A087WSY6 115 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 B9A039 149 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 GTPBP1O00178 669 aaKnown RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 PDE5AO76074 875 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 KRT75O95678 551 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ATP6V1C1P21283 382 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SLC7A1P30825 629 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 CHI3L1P36222 383 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SERPINF1P36955 418 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 KHKP50053 298 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 RPS26P62854 115 aaKnown RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 TXNL4AP83876 142 aaKnown RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 PDK3Q15120 406 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 DNAL1Q4LDG9 190 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 MIDNQ504T8 468 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 RUNDC3AQ59EK9 446 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ZCCHC12Q6PEW1 402 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SLC46A3Q7Z3Q1 461 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 C17orf78Q8N4C9 275 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 WDR31Q8NA23 367 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 OR5D16Q8NGK9 328 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ADAMTS15Q8TE58 950 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SLC7A6OSQ96CW6 309 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 CPPED1Q9BRF8 314 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ACTRT3Q9BYD9 372 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 RAB1BQ9H0U4 201 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 PIGUQ9H490 435 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 RAD21L1Q9H4I0 556 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 SPAG4Q9NPE6 437 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 ASB6Q9NWX5 421 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 EMC3Q9P0I2 261 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 MALT1Q9UDY8 824 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.46
FAM3A-218ENST00000475657 CORO2BQ9UQ03 480 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 AP3M1Q9Y2T2 418 aa12.15□□□□□ -0.46
FAM3A-218ENST00000475657 A0A1W2PNR3 127 aa12.14□□□□□ -0.47
FAM3A-218ENST00000475657 A0A1W2PR80 420 aa12.14□□□□□ -0.47
FAM3A-218ENST00000475657 EVPLLA8MZ36 301 aa12.14□□□□□ -0.47
FAM3A-218ENST00000475657 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
FAM3A-218ENST00000475657 CLIC1O00299 241 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms