RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 NUDT6P53370 316 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 CRISP3P54108 245 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 PRPS1P60891 318 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 DSTNP60981 165 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TUBA1BP68363 451 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TUBA4AP68366 448 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 RAB35Q15286 201 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 NRF1Q16656 503 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM249Q2WGJ8 235 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ELOA3BQ3SY89 546 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TBRG1Q3YBR2 411 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 LIN52Q52LA3 116 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 RNF220Q5VTB9 566 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 NXNQ6DKJ4 435 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM225Q6GV28 225 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF544Q6NX49 715 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ANKRD16Q6P6B7 361 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 EPGNQ6UW88 154 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 NHLRC1Q6VVB1 395 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TUBA1AQ71U36 451 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 MYPOPQ86VE0 399 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 HEATR5AQ86XA9 2040 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF440Q8IYI8 595 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 FBXL14Q8N1E6 418 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 C17orf78Q8N4C9 275 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ARIH2OSQ8N7S6 290 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ELOA3Q8NG57 546 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 SPATA3Q8NHX4 192 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 C10orf105Q8TEF2 133 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TNFRSF13CQ96RJ3 184 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 RHNO1Q9BSD3 238 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 SPATA9Q9BWV2 254 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 NELFAQ9H3P2 528 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 IKZF5Q9H5V7 419 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 SEC61A2Q9H9S3 476 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 BARX1Q9HBU1 254 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 TMBIM4Q9HC24 238 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 BCL2L10Q9HD36 194 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZIM2Q9NZV7 527 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 P2RX2Q9UBL9 471 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 POU2F3Q9UKI9 436 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 MOKQ9UQ07 419 aa6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF443Q9Y2A4 671 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-207ENST00000475549 ALPK2Q86TB3 2170 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 TRBV5-3A0A0A0MS03 114 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 A8MV72 311 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 VWC2LB2RUY7 222 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 SLCO1B7G3V0H7 640 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 CLIC1O00299 241 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 FZD7O75084 574 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 F12P00748 615 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 IGLV1-44P01699 117 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 IGFBP1P08833 259 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 CELA3BP08861 270 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 PNMTP11086 282 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 BMP2P12643 396 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 UQCRBP14927 111 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 CALCRP30988 508 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 RPS5P46782 204 aaKnown RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 MRPL19P49406 292 aaKnown RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 IDH3AP50213 366 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ANXA11P50995 505 aaKnown RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 EFNA4P52798 201 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 VLDLRP98155 873 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 TGFBR3Q03167 851 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 HGFACQ04756 655 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 LOXL1Q08397 574 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 GNA13Q14344 377 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ADRM1Q16186 407 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 GLIPR1L2Q4G1C9 344 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF311Q5JNZ3 666 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 PAGE3Q5JUK9 113 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 PHYHD1Q5SRE7 291 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 BEND6Q5SZJ8 279 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 C6orf52Q5T4I8 152 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ATG16L1Q676U5 607 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 HMBOX1Q6NT76 420 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 C6orf89Q6UWU4 347 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 POMGNT2Q8NAT1 580 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 MFSD8Q8NHS3 518 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 FAM168AQ92567 244 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 TAAR8Q969N4 342 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 SLC25A36Q96CQ1 311 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ITCHQ96J02 903 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ADAD1Q96M93 576 aaKnown RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ALKBH3Q96Q83 286 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ZBTB18Q99592 522 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 EBF4Q9BQW3 602 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 PIF1Q9H611 641 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 A4GALTQ9NPC4 353 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 TMEM45AQ9NWC5 275 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 VAPAQ9P0L0 249 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 CRNNQ9UBG3 495 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-207ENST00000475549 PRDM4Q9UKN5 801 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ZNF232Q9UNY5 417 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 AMDHD2Q9Y303 409 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 ATP23Q9Y6H3 246 aa6.11□□□□□ -1.43
HDAC3-207ENST00000475549 USH1CQ9Y6N9 552 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms