RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 IL7RP16871 459 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 EPS8Q12929 822 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 NPRL3Q12980 569 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 RIN1Q13671 783 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 MRPL2Q5T653 305 aaKnown RBP17.71■□□□□ 0.43
VPS36-203ENST00000475375 LINGO2Q7L985 606 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 ANKFN1Q8N957 763 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 OR8J2Q8NGG1 315 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 MAGEE2Q8TD90 523 aaPredicted RBP17.71■□□□□ 0.43
VPS36-203ENST00000475375 ZFAND2BQ8WV99 257 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 ZMYND19Q96E35 227 aaPredicted RBP17.71■□□□□ 0.43
VPS36-203ENST00000475375 NEURL3Q96EH8 262 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 ZNF317Q96PQ6 595 aaPredicted RBP17.71■□□□□ 0.43
VPS36-203ENST00000475375 TPK1Q9H3S4 243 aa17.71■□□□□ 0.43
VPS36-203ENST00000475375 MEGF8Q7Z7M0 2845 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 TLDC2A0PJX2 215 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 AGAP5A6NIR3 686 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 HMGN4O00479 90 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 FAAHO00519 579 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 UPK3AO75631 287 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 ARRB2P32121 409 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 SERPINB5P36952 375 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 ROR2Q01974 943 aaKnown RBP17.7■□□□□ 0.42
VPS36-203ENST00000475375 BNIP2Q12982 314 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 SCGB2A2Q13296 93 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 SYPL1Q16563 259 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 PRAMEF8Q5VWM4 474 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 PRAMEF7Q5VXH5 474 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 CREB3L2Q70SY1 520 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 MYPOPQ86VE0 399 aaPredicted RBP17.7■□□□□ 0.42
VPS36-203ENST00000475375 CDK20Q8IZL9 346 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 CADM2Q8N3J6 435 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 SEMA6DQ8NFY4 1073 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 GCDHQ92947 438 aaPredicted RBP17.7■□□□□ 0.42
VPS36-203ENST00000475375 TRNT1Q96Q11 434 aaKnown RBP17.7■□□□□ 0.42
VPS36-203ENST00000475375 NARFLQ9H6Q4 476 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 LPAR2Q9HBW0 351 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 MKS1Q9NXB0 559 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 ASIC5Q9NY37 505 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 DYSFO75923 2080 aa17.7■□□□□ 0.42
VPS36-203ENST00000475375 IGHV2OR16-5A0A0B4J2B6 119 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 SPAG7O75391 227 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 VAMP5O95183 116 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 CHRM4P08173 479 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 CAPZA2P47755 286 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 SH3BGRP55822 239 aaPredicted RBP17.69■□□□□ 0.42
VPS36-203ENST00000475375 SNTB2Q13425 540 aaKnown RBP17.69■□□□□ 0.42
VPS36-203ENST00000475375 GSTA3Q16772 222 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 RNF130Q86XS8 419 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 FAM169BQ8N8A8 192 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 ZNF418Q8TF45 676 aaPredicted RBP17.69■□□□□ 0.42
VPS36-203ENST00000475375 SLC38A1Q9H2H9 487 aa17.69■□□□□ 0.42
VPS36-203ENST00000475375 MTHFD2LQ9H903 347 aaPredicted RBP17.69■□□□□ 0.42
VPS36-203ENST00000475375 TMEM129A0AVI4 362 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 IGKV3-15P01624 115 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 GKN3PP0CG01 181 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 NR2F1P10589 423 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 HOXB1P14653 301 aaPredicted RBP17.68■□□□□ 0.42
VPS36-203ENST00000475375 CBR1P16152 277 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 ANXA11P50995 505 aaKnown RBP17.68■□□□□ 0.42
VPS36-203ENST00000475375 COPZ1P61923 177 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 ARF1P84077 181 aaKnown RBP17.68■□□□□ 0.42
VPS36-203ENST00000475375 PDCD2Q16342 344 aaPredicted RBP17.68■□□□□ 0.42
VPS36-203ENST00000475375 KRT80Q6KB66 452 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 THSD4Q6ZMP0 1018 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 ZNF440Q8IYI8 595 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 SGMS2Q8NHU3 365 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 NELFAQ9H3P2 528 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 CRLF2Q9HC73 371 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 RLIMQ9NVW2 624 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 HIF1ANQ9NWT6 349 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 RASD1Q9Y272 281 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 MGAM2Q2M2H8 2515 aa17.68■□□□□ 0.42
VPS36-203ENST00000475375 A8MVM7 634 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 FRS3O43559 492 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 C1QCP02747 245 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 DBIP07108 87 aaKnown RBP17.67■□□□□ 0.42
VPS36-203ENST00000475375 EGR1P18146 543 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 P2RY4P51582 365 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 DAG1Q14118 895 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 SMU1Q2TAY7 513 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 C1orf140Q5VVS0 124 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 LRRC74BQ6ZQY2 392 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 EPHX4Q8IUS5 362 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 PEX5LQ8IYB4 626 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 TCP10LQ8TDR4 215 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 TMEM186Q96B77 213 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 LINC00470Q9BZP3 86 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 AKTIPQ9H8T0 292 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 GRIP1Q9Y3R0 1128 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 CMAHPQ9Y471 501 aa17.67■□□□□ 0.42
VPS36-203ENST00000475375 NCF2P19878 526 aaPredicted RBP17.66■□□□□ 0.42
VPS36-203ENST00000475375 ARR3P36575 388 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 GPR6P46095 362 aaPredicted RBP17.66■□□□□ 0.42
VPS36-203ENST00000475375 CLDN17P56750 224 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 CASP8Q14790 479 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 SPANXN4Q5MJ08 99 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 DEF8Q6ZN54 512 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 MDP1Q86V88 176 aa17.66■□□□□ 0.42
VPS36-203ENST00000475375 KDM8Q8N371 416 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms