RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 VRK1Q99986 396 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-205ENST00000474996 KCNS3Q9BQ31 491 aa12.51□□□□□ -0.41
COL2A1-205ENST00000474996 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
COL2A1-205ENST00000474996 PIF1Q9H611 641 aa12.51□□□□□ -0.41
COL2A1-205ENST00000474996 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
COL2A1-205ENST00000474996 CA10Q9NS85 328 aa12.51□□□□□ -0.41
COL2A1-205ENST00000474996 KCNS2Q9ULS6 477 aa12.51□□□□□ -0.41
COL2A1-205ENST00000474996 IGHV4-61A0A0C4DH41 118 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 LOC100289279A0A1B0GTE1 492 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 A8MVM7 634 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 ZNF587BE7ETH6 402 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 NDUFS8O00217 210 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 NR5A2O00482 541 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 SDHDO14521 159 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 FRS3O43559 492 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 KRT75O95678 551 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 CRYAAP02489 173 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 PRG2P13727 222 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 APEHP13798 732 aaKnown RBP12.5□□□□□ -0.41
COL2A1-205ENST00000474996 SRD5A1P18405 259 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 UBE2NP61088 152 aaKnown RBP12.5□□□□□ -0.41
COL2A1-205ENST00000474996 COPZ1P61923 177 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 TUBA1BP68363 451 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 TUBA4AP68366 448 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 LRRC74AQ0VAA2 488 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 BST1Q10588 318 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 MPP2Q14168 576 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 LIN52Q52LA3 116 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 FAM120AOSQ5T036 256 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 WBP2NLQ6ICG8 309 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 NIPAL3Q6P499 406 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 VHLLQ6RSH7 139 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 CREB3L2Q70SY1 520 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 TUBA1AQ71U36 451 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 SPATA19Q7Z5L4 167 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 BCL2L2Q92843 193 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-205ENST00000474996 ATP6V1G3Q96LB4 118 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 KATNB1Q9BVA0 655 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 SLC6A13Q9NSD5 602 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 GPR45Q9Y5Y3 372 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
COL2A1-205ENST00000474996 A0A096LPE4 126 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 A0A1W2PPZ6 126 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 LOC390937A0A1W2PQ73 354 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 HMGB1P1B2RPK0 211 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-205ENST00000474996 RFXANKO14593 260 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 UPK3AO75631 287 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 BCHEP06276 602 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 OR4A8P0C604 315 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 CECR9P0C854 216 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ETFAP13804 333 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 THBS2P35442 1172 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 MVDP53602 400 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 NAAAQ02083 359 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ADIPOQQ15848 244 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 TTMPQ5BVD1 217 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-205ENST00000474996 C1orf140Q5VVS0 124 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 PRAMEF8Q5VWM4 474 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 PRAMEF7Q5VXH5 474 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ANKRD16Q6P6B7 361 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 EPHX4Q8IUS5 362 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 CLIP4Q8N3C7 705 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ZBTB9Q96C00 473 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ZBTB18Q99592 522 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 C19orf24Q9BVV8 132 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 WDR55Q9H6Y2 383 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-205ENST00000474996 SEC61A2Q9H9S3 476 aa12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ZNF443Q9Y2A4 671 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-205ENST00000474996 ARPC4-TTLL3A0A0A6YYG9 625 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 B9A039 149 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 NPIPB7O75200 414 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 VAMP5O95183 116 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 TFPTP0C1Z6 253 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 NCF2P19878 526 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-205ENST00000474996 EPHA3P29320 983 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CALCRP30988 508 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CRATP43155 626 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CRISP3P54108 245 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 RNF220Q5VTB9 566 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 KDM8Q8N371 416 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 GOLGA6L1Q8N7Z2 621 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 SLC38A5Q8WUX1 472 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
COL2A1-205ENST00000474996 BPESC1Q9GZL8 116 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CENPHQ9H3R5 247 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 PLK3Q9H4B4 646 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 MYOZ1Q9NP98 299 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-205ENST00000474996 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CALML5Q9NZT1 146 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CRNNQ9UBG3 495 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-205ENST00000474996 RASD1Q9Y272 281 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 CHST2Q9Y4C5 530 aa12.48□□□□□ -0.41
COL2A1-205ENST00000474996 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
COL2A1-205ENST00000474996 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms