RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 FAM27D1Q5T7N8 215 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 HES5Q5TA89 166 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ALKAL2Q6UX46 152 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CHMP1BQ7LBR1 199 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SLC16A13Q7RTY0 426 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNF511Q8NB15 262 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TMEM229BQ8NBD8 167 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 BEST4Q8NFU0 473 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 C16orf78Q8WTQ4 265 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZNRF4Q8WWF5 429 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 RAB40AQ8WXH6 277 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 AQP3Q92482 292 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 NTNG2Q96CW9 530 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TCEAL4Q96EI5 215 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PELI1Q96FA3 418 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 ZDHHC12Q96GR4 267 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SYT3Q9BQG1 590 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 AP5M1Q9H0R1 490 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 LRRN3Q9H3W5 708 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 SMDT1Q9H4I9 107 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 APMAPQ9HDC9 416 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 CHST11Q9NPF2 352 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 TDP1Q9NUW8 608 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MPP6Q9NZW5 540 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 VPS29Q9UBQ0 182 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 PIN4Q9Y237 131 aaKnown RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 GPR55Q9Y2T6 319 aaPredicted RBP3.74□□□□□ -1.81
USP16-205ENST00000474835 PPP2R3BQ9Y5P8 575 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 MYO10Q9HD67 2058 aa3.74□□□□□ -1.81
USP16-205ENST00000474835 NCKAP5O14513 1909 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 TRBV23-1A0A0A0MS06 115 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 UNC119BA6NIH7 251 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 IQCF5A8MTL0 148 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 K7EP13 123 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 AP4M1O00189 453 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 CHST10O43529 356 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 STK16O75716 305 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 TXNDC12O95881 172 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 GAPDHP04406 335 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 MMP3P08254 477 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 SBK2P0C263 348 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 LINC00614P0C842 121 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 OR8G3PP0DMU2 310 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 CLUP10909 449 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 ADRB3P13945 408 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 POU2F1P14859 743 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 ACADLP28330 430 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MC4RP32245 332 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 GDI2P50395 445 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 LUMP51884 338 aaPredicted RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 TRA2BP62995 288 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 IL18Q14116 193 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 DOC2AQ14183 400 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 AGERQ15109 404 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 IRF4Q15306 451 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 SNAPC1Q16533 368 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MESTQ5EB52 335 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 TRIM61Q5EBN2 209 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 DHRS11Q6UWP2 260 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MEPCEQ7L2J0 689 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 FAM122BQ7Z309 247 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 NXPE1Q8N323 547 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 PRSS35Q8N3Z0 413 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 RNF175Q8N4F7 328 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 CELF5Q8N6W0 485 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 ZSCAN1Q8NBB4 408 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 C19orf18Q8NEA5 215 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 OR10K1Q8NGX5 313 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 HASPINQ8TF76 798 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 OVCA2Q8WZ82 227 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 EXT2Q93063 718 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 RAB24Q969Q5 203 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 PACRGQ96M98 296 aaPredicted RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 COPS8Q99627 209 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 SLC17A9Q9BYT1 436 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 ATXN3LQ9H3M9 355 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MTG2Q9H4K7 406 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 ZNF768Q9H5H4 540 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 EGLN3Q9H6Z9 239 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 NRIP3Q9NQ35 241 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MARCH2Q9P0N8 246 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 ZNF230Q9UIE0 474 aaPredicted RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 TUBD1Q9UJT1 453 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 HSF4Q9ULV5 492 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 CELSR3Q9NYQ7 3312 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 TRDCB7Z8K6 153 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 FCN1O00602 326 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 LCMT2O60294 686 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 SOCS5O75159 536 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 STX11O75558 287 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 FCER2P06734 321 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 MYOGP15173 224 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 IMPA1P29218 277 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 HCCSP53701 268 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 SNRPEP62304 92 aaKnown RBP3.73□□□□□ -1.81
USP16-205ENST00000474835 TLE2Q04725 743 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 TEAD2Q15562 447 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 SSX2Q16385 188 aa3.73□□□□□ -1.81
USP16-205ENST00000474835 RPE65Q16518 533 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms