RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CMAHPQ9Y471 501 aa19.78■□□□□ 0.76
CCM2-206ENST00000474617 IGLV3-32A0A0A0MS00 114 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 TMED7-TICAM2A0A0A6YYA0 188 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ETV2O00321 342 aaPredicted RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 FLRT2O43155 660 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 LDOC1O95751 146 aaPredicted RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 LALBAP00709 142 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 RENP00797 406 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 CCKBRP32239 447 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 AQP2P41181 271 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 GBX2P52951 348 aaPredicted RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 DEFA1P59665 94 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 DEFA3P59666 94 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 CTXN1P60606 82 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ERVK-25P63136 954 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ZNF85Q03923 595 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 EXT1Q16394 746 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 CDONQ4KMG0 1287 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 FCRLBQ6BAA4 426 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 TPRA1Q86W33 373 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 SLC35F2Q8IXU6 374 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 DND1Q8IYX4 353 aaKnown RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 TEX19Q8NA77 164 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 OR2T4Q8NH00 348 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ACOT12Q8WYK0 555 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 PHYHIPQ92561 330 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 KIAA1143Q96AT1 154 aaPredicted RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 KTI12Q96EK9 354 aaPredicted RBP19.77■□□□□ 0.76
CCM2-206ENST00000474617 MOGAT1Q96PD6 335 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 DEPDC7Q96QD5 511 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 TIMP4Q99727 224 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 TM9SF2Q99805 663 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 BARHL1Q9BZE3 327 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 TMED7Q9Y3B3 224 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ADAM18Q9Y3Q7 739 aa19.77■□□□□ 0.76
CCM2-206ENST00000474617 ARPC4-TTLL3A0A0A6YYG9 625 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 A0A1W2PQL4 384 aaPredicted RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 IGHEP01854 428 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 PTBP1P26599 531 aaKnown RBP eCLIP19.76■□□□□ 0.759e-9■■■■■ 35.7
CCM2-206ENST00000474617 SDC2P34741 201 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 CD79BP40259 229 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 RPL18Q07020 188 aaKnown RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 MZT2AQ6P582 158 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 PLEKHG7Q6ZR37 379 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 TMEM105Q8N8V8 129 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 OR5J2Q8NH18 312 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 MOSPD2Q8NHP6 518 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 NEIL3Q8TAT5 605 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 TAAR8Q969N4 342 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 NMNAT3Q96T66 252 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 GTPBP2Q9BX10 602 aaKnown RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 ISG20L2Q9H9L3 353 aaKnown RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 TEX13CA0A0J9YWL9 993 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 HSPB2A8KAH6 182 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 PATE3B3GLJ2 98 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 CASKO14936 926 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 ZNF208O43345 1280 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 SCO2O43819 266 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 SUSD5O60279 629 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 AHSA1O95433 338 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 FKBP2P26885 142 aaKnown RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 HSPB2Q16082 182 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 SLC6A19Q695T7 634 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 LEG1Q6P5S2 330 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 BTLAQ7Z6A9 289 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 MARCH9Q86YJ5 346 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 KCTD12Q96CX2 325 aaKnown RBP19.76■□□□□ 0.75
CCM2-206ENST00000474617 C4orf36Q96KX1 117 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 ZPBPQ9BS86 351 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 TMED9Q9BVK6 235 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 RTN4RQ9BZR6 473 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 MYOTQ9UBF9 498 aa19.76■□□□□ 0.75
CCM2-206ENST00000474617 ASCC3Q8N3C0 2202 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 IGHV3-20A0A0C4DH32 117 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 ZC3H12DA2A288 527 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 OR6C68A6NDL8 312 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 NPIPB13A6NJU9 1138 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 NPIPB4C9JG80 1138 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 LRRN3E7EW58 273 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 PHYHO14832 338 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 KHNYNO15037 678 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 PTTG1O95997 202 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 IGHMP01871 453 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 FBXO45P0C2W1 286 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 CLUP10909 449 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 TNFSF8P32971 234 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 PPP3R1P63098 170 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 HNRNPA0Q13151 305 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 COL28A1Q2UY09 1125 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 C1orf140Q5VVS0 124 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 DMKNQ6E0U4 476 aaPredicted RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 RPL22L1Q6P5R6 122 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 METAP1DQ6UB28 335 aaPredicted RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 SLC16A9Q7RTY1 509 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 LSM14AQ8ND56 463 aaKnown RBP19.75■□□□□ 0.75
CCM2-206ENST00000474617 DUSP19Q8WTR2 217 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 KCNS3Q9BQ31 491 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 CPNE5Q9HCH3 593 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 KLHL1Q9NR64 748 aa19.75■□□□□ 0.75
CCM2-206ENST00000474617 ADAM30Q9UKF2 790 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms