RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 KIAA0895LQ68EN5 471 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TXNDC8Q6A555 127 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF529Q6P280 563 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SHFQ7M4L6 423 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 LINC01551Q86U37 167 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 LRRC28Q86X40 367 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 MFSD6LQ8IWD5 586 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 RIMKLAQ8IXN7 391 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SLC5A8Q8N695 610 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR1L4Q8NGR5 311 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR5K1Q8NHB7 308 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 S100ZQ8WXG8 99 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 RGP1Q92546 391 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 P2RY11Q96G91 374 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TMEM19Q96HH6 336 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR10C1Q96KK4 312 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 VSTM2LQ96N03 204 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF582Q96NG8 517 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 FYTTD1Q96QD9 318 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR2A14Q96R47 310 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 JMJD8Q96S16 334 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MESP1Q9BRJ9 268 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TRIM51Q9BSJ1 452 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FICDQ9BVA6 458 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MS4A8Q9BY19 250 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CADM1Q9BY67 442 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 TLNRD1Q9H1K6 362 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PRO1933Q9H354 126 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 HACL1Q9UJ83 578 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PDE10AQ9Y233 779 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FCF1Q9Y324 198 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 CAMSAP1Q5T5Y3 1602 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 BIVM-ERCC5R4GMW8 1640 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 BLOC1S5-TXNDC5H3BN57 136 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 H3BNH8 94 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 J3KTA2 159 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR2J3O76001 311 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SLC25A27O95847 323 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FGF2P09038 288 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CYP2D6P10635 497 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ACP5P13686 325 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 GSPT1P15170 499 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 ARSAP15289 507 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TBPP20226 339 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 STOMP27105 288 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ITPKBP27987 946 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 DUSP1P28562 367 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SDC4P31431 198 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SLC19A1P41440 591 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 RAB7AP51149 207 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 HMGCS2P54868 508 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PAX9P55771 341 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MALLQ13021 153 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SHHQ15465 462 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NR0B2Q15466 257 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TEAD2Q15562 447 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PTPN20Q4JDL3 420 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 RFTN2Q52LD8 501 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 H3F3CQ6NXT2 135 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PNCKQ6P2M8 343 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FAHD1Q6P587 224 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 DOK6Q6PKX4 331 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CASP12Q6UXS9 341 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 C19orf35Q6ZS72 473 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 DPY19L4Q7Z388 723 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PRICKLE2Q7Z3G6 844 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF572Q7Z3I7 529 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 SPRED2Q7Z698 418 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NPAS3Q8IXF0 933 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF683Q8IZ20 524 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 DAW1Q8N136 415 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TSPAN14Q8NG11 270 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR4P4Q8NGL7 312 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FCGR1BQ92637 280 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TFGQ92734 400 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 MOAP1Q96BY2 351 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 WDR89Q96FK6 387 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 BARHL1Q9BZE3 327 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NMNAT2Q9BZQ4 307 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NKX6-2Q9C056 277 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 NXF2Q9GZY0 626 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 ATG10Q9H0Y0 220 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NKX2-4Q9H2Z4 354 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 RANGRFQ9HD47 186 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 RAB6BQ9NRW1 208 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 JPT1Q9UK76 154 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NDRG4Q9ULP0 352 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 B3GALT1Q9Y5Z6 326 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CDK5RAP2Q96SN8 1893 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 GJE1A6NN92 205 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 GPR25O00155 361 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SYNGR3O43761 229 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SCG5P05408 212 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CELA3BP08861 270 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR10J4P0C629 311 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FAM87AP0C7U9 286 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PMCHP20382 165 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 HRH2P25021 359 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms