RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ZNF175Q9Y473 711 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 U3KQV3 271 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 NOTCH2Q04721 2471 aa9.24□□□□□ -0.93
CASC3-204ENST00000474190 IGKV3D-15A0A087WSY6 115 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 A0A0G2JNJ9 132 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 GJE1A6NN92 205 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 E9PLN8 166 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 SULT2B1O00204 365 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 PLPP3O14495 311 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 DNPH1O43598 174 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 CYTIPO60759 359 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 AHSA1O95433 338 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 CGAP01215 116 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 GASTP01350 101 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 IGFBP1P08833 259 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 HOXB6P17509 224 aaKnown RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 PRKACGP22612 351 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 KIR2DL2P43627 348 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 SLC16A1P53985 500 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 MICAQ29983 383 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.23□□□□□ -0.939e-9■■□□□ 12.3
CASC3-204ENST00000474190 C1orf94Q6P1W5 598 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 TTC33Q6PID6 262 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 C5orf46Q6UWT4 87 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 THSD4Q6ZMP0 1018 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 CYP4Z1Q86W10 505 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 KIF18BQ86Y91 864 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 KDM8Q8N371 416 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 ADPRHL1Q8NDY3 354 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 MOSPD2Q8NHP6 518 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 BPIFA2Q96DR5 249 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 FAM46AQ96IP4 442 aaKnown RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 TRIB1Q96RU8 372 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 VKORC1Q9BQB6 163 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 TP63Q9H3D4 680 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 FKRPQ9H9S5 495 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 ALKBH4Q9NXW9 302 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 MRPL39Q9NYK5 338 aaKnown RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 REV1Q9UBZ9 1251 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 NKX1-2Q9UD57 310 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 Q9UFV3 132 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 ERRFI1Q9UJM3 462 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 MED31Q9Y3C7 131 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 FAM32AQ9Y421 112 aaKnown RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 SPIN1Q9Y657 262 aaPredicted RBP9.23□□□□□ -0.93
CASC3-204ENST00000474190 ALPK2Q86TB3 2170 aa9.23□□□□□ -0.93
CASC3-204ENST00000474190 LOC102725191A0A1B0GVB3 256 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 ARRDC5A6NEK1 342 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SLC22A20A6NK97 555 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 E9PQ18 207 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 PRRG2O14669 202 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 HNRNPRO43390 633 aaKnown RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 TRAF3IP2O43734 574 aaPredicted RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 SS18L1O75177 396 aaPredicted RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 RCBTB2O95199 551 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 MT-ATP6P00846 226 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 HOXD4P09016 255 aaPredicted RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 IFI30P13284 250 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 GABRA1P14867 456 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 DNAJA1P31689 397 aaKnown RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 PTGER4P35408 488 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 TIMP3P35625 211 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 GPR4P46093 362 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 OR2B6P58173 313 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SLC35A1P78382 337 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 ZP4Q12836 540 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 PDK3Q15120 406 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 FGD3Q5JSP0 725 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 ZFP1Q6P2D0 407 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 FAHD1Q6P587 224 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SHQ1Q6PI26 577 aaKnown RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 B3GNT6Q6ZMB0 384 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 ZNF730Q6ZMV8 503 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 FCRLAQ7L513 359 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 OR13C2Q8NGS9 318 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 SLC25A36Q96CQ1 311 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SGTBQ96EQ0 304 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 CCDC120Q96HB5 630 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 TNFRSF13CQ96RJ3 184 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 NIPSNAP1Q9BPW8 284 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SEMA6AQ9H2E6 1030 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 BCO1Q9HAY6 547 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SELENONQ9NZV5 590 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 KLHL13Q9P2N7 655 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 TMEFF2Q9UIK5 374 aaPredicted RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 SH3BGRL2Q9UJC5 107 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 ZNF229Q9UJW7 825 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SIGLEC7Q9Y286 467 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 HIF3AQ9Y2N7 669 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 SAMHD1Q9Y3Z3 626 aaKnown RBP9.22□□□□□ -0.93
CASC3-204ENST00000474190 GTF3C1Q12789 2109 aa9.22□□□□□ -0.93
CASC3-204ENST00000474190 TRGV8A0A0C4DH27 118 aa9.21□□□□□ -0.94
CASC3-204ENST00000474190 A0A1W2PNV4 684 aa9.21□□□□□ -0.94
CASC3-204ENST00000474190 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
CASC3-204ENST00000474190 LRRTM2O43300 516 aa9.21□□□□□ -0.94
CASC3-204ENST00000474190 OR2T1O43869 369 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms