RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 GMNCA6NCL1 334 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 A8MXQ7 604 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 E7ENQ6 273 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 RAMP3O60896 148 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 GPX5O75715 221 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF189O75820 626 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 FLOT1O75955 427 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ATP5LO75964 103 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 KRT14P02533 472 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF883P0CG24 379 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 SFTPCP11686 197 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PCMT1P22061 227 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 IL12AP29459 219 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 LEPP41159 167 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 DUSP3P51452 185 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 IST1P53990 364 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PKNOX1P55347 436 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CCNA1P78396 465 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PAX2Q02962 417 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ASAH1Q13510 395 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CUL1Q13616 776 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 RUNX3Q13761 415 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ARL6IP1Q15041 203 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 FCN2Q15485 313 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 SLC22A6Q4U2R8 563 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PAGE2BQ5JRK9 111 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 SLC22A10Q63ZE4 541 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 FAM199XQ6PEV8 388 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CCBE1Q6UXH8 406 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 HSDL2Q6YN16 418 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ARCQ7LC44 396 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CDR2LQ86X02 465 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CD302Q8IX05 232 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 OR1L4Q8NGR5 311 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 KCNG3Q8TAE7 436 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 MAGEE2Q8TD90 523 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 STMN2Q93045 179 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 SLC35B4Q969S0 331 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 FGGYQ96C11 551 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 FAF2Q96CS3 445 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 NUS1Q96E22 293 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CELF6Q96J87 481 aaKnown RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PLEKHF1Q96S99 279 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ZNHIT6Q9NWK9 470 aaKnown RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 PAK1IP1Q9NWT1 392 aaPredicted RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF639Q9UID6 485 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 ANGPTL2Q9UKU9 493 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 TMED5Q9Y3A6 229 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 LRRC42Q9Y546 428 aa3.31□□□□□ -1.88
BRCA1-212ENST00000473961 TDRD15B5MCY1 1934 aaKnown RBP3.31□□□□□ -1.88
BRCA1-212ENST00000473961 CHD2O14647 1828 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ARHGEF5Q12774 1597 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 TTC37Q6PGP7 1564 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 LMTK2Q8IWU2 1503 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 NPHP4O75161 1426 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ADCY9O60503 1353 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 KIAA0232Q92628 1395 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 BTBD17A6NE02 478 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 IDSB3KWA1 339 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 HAS3O00219 553 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SAP18O00422 153 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 BIRC5O15392 142 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 UGT1A9O60656 530 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 TBL1XO60907 577 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF253O75346 499 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SCRG1O75711 98 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 DUSP14O95147 198 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 CALCRP30988 508 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 UGT1A3P35503 534 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 CCT6AP40227 531 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 KIR2DS2P43631 304 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 CSRP3P50461 194 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 MRPS25P82663 173 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 MYL5Q02045 173 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 BST1Q10588 318 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 CFAP221Q4G0U5 840 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 EIPR1Q53HC9 387 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SAMD4BQ5PRF9 694 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 C1orf220Q5T0J3 134 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF658Q5TYW1 1059 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 RNLSQ5VYX0 342 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SPECC1LQ69YQ0 1117 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 UFSP1Q6NVU6 142 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 C16orf87Q6PH81 154 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 GSG1LQ6UXU4 331 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 OTUD6AQ7L8S5 288 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ECHDC2Q86YB7 292 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 SPATA4Q8NEY3 305 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 OR9A1PQ8NGU1 263 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ANKRD49Q8WVL7 239 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 RAPGEF5Q92565 580 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 KIFAP3Q92845 792 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 TSNARE1Q96NA8 513 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF670Q9BS34 389 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 NMUR2Q9GZQ4 415 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 NCOR1P1Q9H4R4 102 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 IKZF5Q9H5V7 419 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms