RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OBP2AQ9NY56 170 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MBD2Q9UBB5 411 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 MTFP1Q9UDX5 166 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 DAPP1Q9UN19 280 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 NTNG1Q9Y2I2 539 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 RWDD3Q9Y3V2 267 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 SLC22A7Q9Y694 548 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 COL4A3Q01955 1670 aa5.63□□□□□ -1.51
HERC4-209ENST00000473533 TBC1D3IA0A087WXS9 549 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 A0A1B0GVC2 190 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 A0A1B0GWA3 101 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 KANTRA0A1W2PQU2 76 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 A6NIN4 97 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TMEM212A6NML5 194 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SRPX2O60687 465 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 GLSO94925 669 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 NKX2-2O95096 273 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 GPR75O95800 540 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MELTFP08582 738 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 NMBP08949 121 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ANKRD34CP0C6C1 535 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 GKN3PP0CG01 181 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF888P0CJ79 500 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 CFPP27918 469 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 GRK6P43250 576 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 STARP49675 285 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PPP2CBP62714 309 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PPP2CAP67775 309 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 DUSP2Q05923 314 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZMYND11Q15326 602 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 LTB4RQ15722 352 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF750Q32MQ0 723 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 HES5Q5TA89 166 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PWWP2BQ6NUJ5 590 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TSSK4Q6SA08 328 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 THSD4Q6ZMP0 1018 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PGAP1Q75T13 922 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR2AK2Q8NG84 335 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR5M9Q8NGP3 310 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 COQ8AQ8NI60 647 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZFPM2Q8WW38 1151 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZMYND19Q96E35 227 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 HCAR1Q9BXC0 346 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 AICDAQ9GZX7 198 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 XKR8Q9H6D3 395 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TMEM138Q9NPI0 162 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 HCFC1R1Q9NWW0 138 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 STEAP1Q9UHE8 339 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OPN4Q9UHM6 478 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SLC17A4Q9Y2C5 497 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TRAV27A0A087WT01 109 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZC3H12DA2A288 527 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 TMEM200CA6NKL6 621 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR2F2O95006 317 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 HOXC4P09017 264 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 PNMTP11086 282 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 RAD52P43351 418 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PTH2RP49190 550 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MAP2K6P52564 334 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR2F1Q13607 317 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ALKBH1Q13686 389 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 CBFBQ13951 182 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 COL9A2Q14055 689 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF273Q14593 569 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 C1orf53Q5VUE5 145 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 DNM1P46Q6ZS02 220 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 Q6ZTK2 550 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PRSS45Q7RTY3 260 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 KANSL1Q7Z3B3 1105 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 DTX3Q8N9I9 347 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 KCT2Q8NC54 265 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 HERVK_113Q902F9 699 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 TNFRSF13CQ96RJ3 184 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 GPX7Q96SL4 187 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 LMF2Q9BU23 707 aaKnown RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZNF416Q9BWM5 594 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 REG4Q9BYZ8 158 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 FBRSQ9HAH7 460 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 IFT46Q9NQC8 304 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 C20orf141Q9NUB4 165 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 PIPOXQ9P0Z9 390 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 THAP10Q9P2Z0 257 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 GPN3Q9UHW5 284 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 KCNMB2Q9Y691 235 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SDK1Q7Z5N4 2213 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 LTBP2Q14767 1821 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SCN5AQ14524 2016 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 FXYD6-FXYD2A0A087WZ82 144 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 RFPL4AA6NLU0 287 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ATP6V1G2-DDX39BF2Z307 99 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 RFPL4AL1F8VTS6 287 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 P2RX6O15547 441 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 GMDSO60547 372 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 ZIC2O95409 532 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 CFDP00746 253 aaPredicted RBP5.62□□□□□ -1.51
HERC4-209ENST00000473533 RLN1P04808 185 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 SMIM10L1P0DMW3 83 aa5.62□□□□□ -1.51
HERC4-209ENST00000473533 CXCL2P19875 107 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms