RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 KCTD8Q6ZWB6 473 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 CXXC5Q7LFL8 322 aaKnown RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 SPARTQ8N0X7 666 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 SNIP1Q8TAD8 396 aaKnown RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 HAS2Q92819 552 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 GGHQ92820 318 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 SIGLEC11Q96RL6 698 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 CCDC90BQ9GZT6 254 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ZFP64Q9NPA5 681 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 MRPS18AQ9NVS2 196 aaKnown RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 PAK1IP1Q9NWT1 392 aaPredicted RBP11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ANKRD10Q9NXR5 420 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 ALKBH4Q9NXW9 302 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 AASSQ9UDR5 926 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 IL20RAQ9UHF4 553 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 KLK13Q9UKR3 277 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 HRH3Q9Y5N1 445 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 MED12Q93074 2177 aa11.58□□□□□ -0.56
VPS13D-205ENST00000473099 CACNA1BQ00975 2339 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 NPIPB13A6NJU9 1138 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 NPIPB4C9JG80 1138 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 MCIDASD6RGH6 385 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 FTCDNL1E5RQL4 147 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 LRRN3E7EW58 273 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 KLRC4-KLRK1H3BQV0 150 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 TXNDC12O95881 172 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 DBTP11182 482 aaKnown RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 GRPRP30550 384 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 HTR1FP30939 366 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 SDHAP31040 664 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 AQP2P41181 271 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 DNASE1L1P49184 302 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 NUDT6P53370 316 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 CDH11P55287 796 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 CTXN1P60606 82 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 ZNF91Q05481 1191 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 RPL18Q07020 188 aaKnown RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 LGALS3BPQ08380 585 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 ST3GAL4Q11206 333 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 RAB40BQ12829 278 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 ZP4Q12836 540 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 PMS2P3Q13401 168 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 INPP5JQ15735 1006 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 TBCEQ15813 527 aaPredicted RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 ATP1A1-AS1Q5TC04 95 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 AADACL4Q5VUY2 407 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 RNLSQ5VYX0 342 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 SLC6A19Q695T7 634 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 BORAQ6PGQ7 559 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 CCDC81Q6ZN84 652 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 LINC00696Q6ZRV3 163 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 LRRC75AQ8NAA5 344 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 TMEM178AQ8NBL3 297 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 OR2M7Q8NG81 312 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 SLC25A36Q96CQ1 311 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 GNRHR2Q96P88 292 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 KATNB1Q9BVA0 655 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 OR2B2Q9GZK3 357 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 OR11A1Q9GZK7 315 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 ENKD1Q9H0I2 346 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 HINT3Q9NQE9 182 aaKnown RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 WARS2Q9UGM6 360 aaKnown RBP11.57□□□□□ -0.56
VPS13D-205ENST00000473099 TRAPPC4Q9Y296 219 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 B3GALT5Q9Y2C3 310 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 GPR52Q9Y2T5 361 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 MSRB2Q9Y3D2 182 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 IER3IP1Q9Y5U9 82 aa11.57□□□□□ -0.56
VPS13D-205ENST00000473099 LRRC3CA6NJW4 275 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SLC22A31A6NKX4 558 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 G3V3Y1 287 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SEC14L5O43304 696 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 DNPH1O43598 174 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 NME2P1O60361 137 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 ZIC3O60481 467 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 IGHMP01871 453 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 MT-ND2P03891 347 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SP1P08047 785 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 HTR1AP08908 422 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 ADORA3P0DMS8 318 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 NME2P22392 152 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 ACVR2AP27037 513 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 DCKP27707 260 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 MTNR1AP48039 350 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 ST13P50502 369 aaKnown RBP11.56□□□□□ -0.56
VPS13D-205ENST00000473099 RAC1P63000 192 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 ACACAQ13085 2346 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 NADK2Q4G0N4 442 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SLC35F1Q5T1Q4 408 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 RAET1LQ5VY80 246 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SPINK14Q6IE38 97 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 SLC25A25Q6KCM7 469 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 H1FNTQ75WM6 255 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-205ENST00000473099 FAM122BQ7Z309 247 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 GPR141Q7Z602 305 aa11.56□□□□□ -0.56
VPS13D-205ENST00000473099 CPOQ8IVL8 374 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms