RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TMEM239Q8WW34 195 aa18.49■□□□□ 0.55
TOP3A-204ENST00000472959 RNASE6Q93091 150 aaKnown RBP18.49■□□□□ 0.55
TOP3A-204ENST00000472959 LRGUKQ96M69 825 aa18.49■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF300Q96RE9 604 aaPredicted RBP18.49■□□□□ 0.55
TOP3A-204ENST00000472959 ANKRD19PQ9H560 264 aa18.49■□□□□ 0.55
TOP3A-204ENST00000472959 C6orf203Q9P0P8 240 aaPredicted RBP18.49■□□□□ 0.55
TOP3A-204ENST00000472959 V9GYQ6 96 aa18.49■□□□□ 0.55
TOP3A-204ENST00000472959 J3KTA2 159 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 EBAG9O00559 213 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 ACOT8O14734 319 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 RAMP1O60894 148 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 PRSS23O95084 383 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 GRPRP30550 384 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 P2RY4P51582 365 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 SLC17A1Q14916 467 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 CCDC121Q6ZUS5 278 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 H1FNTQ75WM6 255 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 LUZP2Q86TE4 346 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 ADPRHL1Q8NDY3 354 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 PIK3C3Q8NEB9 887 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 TMEM255BQ8WV15 326 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 RBM24Q9BX46 236 aaKnown RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 ASPNQ9BXN1 380 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 CADM1Q9BY67 442 aaKnown RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 MMADHCQ9H3L0 296 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 NMNAT1Q9HAN9 279 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 IL1RAPQ9NPH3 570 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 NPDC1Q9NQX5 325 aaPredicted RBP18.48■□□□□ 0.55
TOP3A-204ENST00000472959 MED31Q9Y3C7 131 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 ICE1Q9Y2F5 2266 aa18.48■□□□□ 0.55
TOP3A-204ENST00000472959 TCRBV5S2A0A599 114 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 hCG_2039718K7EN88 272 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 M0R082 166 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MT-ND1P03886 318 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 PTNP21246 168 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 GRNP28799 593 aaKnown RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 PEX19P40855 299 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 VLDLRP98155 873 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 LTBQ06643 244 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF74Q16587 644 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 SP5Q6BEB4 398 aaPredicted RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 NUFIP2Q7Z417 695 aaKnown RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 KIF18BQ86Y91 864 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF610Q8N9Z0 462 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF417Q8TAU3 575 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MOGAT1Q96PD6 335 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF587Q96SQ5 575 aaPredicted RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 PIP5K1AQ99755 562 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 OPN3Q9H1Y3 402 aaPredicted RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 LRMDAQ9H2I8 198 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MAGIXQ9H6Y5 334 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 FKRPQ9H9S5 495 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MEPEQ9NQ76 525 aaPredicted RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MAN2C1Q9NTJ4 1040 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 MRPL39Q9NYK5 338 aaKnown RBP18.47■□□□□ 0.55
TOP3A-204ENST00000472959 ELOVL5Q9NYP7 299 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 RHCGQ9UBD6 479 aa18.47■□□□□ 0.55
TOP3A-204ENST00000472959 LOC102725191A0A1B0GVB3 256 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 A0A1W2PRQ8 180 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 C19orf84I3L1E1 186 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 KPNA4O00629 521 aaPredicted RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 FABP3P05413 133 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 H1F0P07305 194 aaKnown RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 UQCRC1P31930 480 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 DGCR6Q14129 220 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 POU4F3Q15319 338 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 IQCCQ4KMZ1 466 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF474Q6S9Z5 364 aaPredicted RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 PIWIL3Q7Z3Z3 882 aaKnown RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 GPAT4Q86UL3 456 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 RNF113BQ8IZP6 322 aaKnown RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ACBD4Q8NC06 268 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 OR9K2Q8NGE7 335 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF775Q96BV0 537 aaPredicted RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF347Q96SE7 839 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 SPOCK3Q9BQ16 436 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ENKD1Q9H0I2 346 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 C12orf49Q9H741 205 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 FANCFQ9NPI8 374 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 NANSQ9NR45 359 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 PARPBPQ9NWS1 579 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 ZNF229Q9UJW7 825 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 NOSIPQ9Y314 301 aaKnown RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 FLVCR1Q9Y5Y0 555 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 INTS1Q8N201 2190 aaKnown RBP18.46■□□□□ 0.55
TOP3A-204ENST00000472959 PTPN13Q12923 2485 aa18.46■□□□□ 0.55
TOP3A-204ENST00000472959 AQP12BA6NM10 295 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 CH25HO95992 272 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 NQO1P15559 274 aaKnown RBP18.45■□□□□ 0.54
TOP3A-204ENST00000472959 IGFBP2P18065 325 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 OR3A2P47893 321 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 UGT2B15P54855 530 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 SMIM11AP58511 58 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 FOXD4Q12950 439 aaPredicted RBP18.45■□□□□ 0.54
TOP3A-204ENST00000472959 PMS2P3Q13401 168 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 TFAP2EQ6VUC0 442 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 BEND4Q6ZU67 534 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 AQP12AQ8IXF9 295 aa18.45■□□□□ 0.54
TOP3A-204ENST00000472959 ACOT11Q8WXI4 607 aaPredicted RBP18.45■□□□□ 0.54
TOP3A-204ENST00000472959 TMEM45BQ96B21 275 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms