RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 PIGFQ07326 219 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 HNRNPA0Q13151 305 aaKnown RBP8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 SNTB2Q13425 540 aaKnown RBP8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 FAM174BQ3ZCQ3 159 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PHYHD1Q5SRE7 291 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PRAMEF8Q5VWM4 474 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PRAMEF7Q5VXH5 474 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PAQR6Q6TCH4 344 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 DEF8Q6ZN54 512 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 CREB3L2Q70SY1 520 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 SSX8Q7RTT4 187 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 MDP1Q86V88 176 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 LRP11Q86VZ4 500 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 CLIP4Q8N3C7 705 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 C17orf78Q8N4C9 275 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 NATD1Q8N6N6 113 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 LINC01356Q8N9X3 169 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 C1orf162Q8NEQ5 155 aaPredicted RBP8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 DOK1Q99704 481 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 SYT3Q9BQG1 590 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 TAPBPLQ9BX59 468 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 NUF2Q9BZD4 464 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 C20orf27Q9GZN8 174 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 SAP130Q9H0E3 1048 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PLK3Q9H4B4 646 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 NOX3Q9HBY0 568 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 CRLF2Q9HC73 371 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PNPOQ9NVS9 261 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 TREM2Q9NZC2 230 aa8.74□□□□□ -1.01
SCAMP3-205ENST00000472397 PRSS51A0A1B0GVH4 220 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 AGAP5A6NIR3 686 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 M0R3G1 203 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 ZNF208O43345 1280 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 DNPH1O43598 174 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 SPRY1O43609 319 aaPredicted RBP8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 EIF1BO60739 113 aaKnown RBP8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 HLA-HP01893 362 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 ETFAP13804 333 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 NCF2P19878 526 aaPredicted RBP8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 NPR2P20594 1047 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 IL12AP29459 219 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 S100A3P33764 101 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 THBS2P35442 1172 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 ALDH3B1P43353 468 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 HTR3AP46098 478 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 CLK1P49759 484 aaKnown RBP8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 AQP5P55064 265 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 CDH15P55291 814 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 ACTG1P63261 375 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 MAPK11Q15759 364 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 CHI3L2Q15782 390 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 ZSWIM7Q19AV6 140 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 GTDC1Q4AE62 458 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 NUDCD3Q8IVD9 361 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 RFLNBQ8N5W9 214 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 POMGNT2Q8NAT1 580 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 OR52P1PQ8NH57 321 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 MIPOL1Q8TD10 442 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 CKAP2Q8WWK9 683 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 PMM1Q92871 262 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 TMEM45BQ96B21 275 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 NEURL3Q96EH8 262 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 KATNB1Q9BVA0 655 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 EXOSC3Q9NQT5 275 aaKnown RBP8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 SLC6A13Q9NSD5 602 aa8.73□□□□□ -1.01
SCAMP3-205ENST00000472397 IGHV2OR16-5A0A0B4J2B6 119 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 SNUPNO95149 360 aaKnown RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 AGR2O95994 175 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 HPXP02790 462 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 BCHEP06276 602 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 PATE4P0C8F1 98 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 CD79AP11912 226 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 RBMXP38159 391 aaKnown RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 IFFO1Q0D2I5 559 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 CASP8Q14790 479 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 EFNB3Q15768 340 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 CEACAM16Q2WEN9 425 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 ANXA8L1Q5VT79 327 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 C1orf140Q5VVS0 124 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 SERPINA11Q86U17 422 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 MEX3DQ86XN8 651 aaKnown RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 OR8J2Q8NGG1 315 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 CLDND2Q8NHS1 167 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 RNF217Q8TC41 542 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 KTI12Q96EK9 354 aaPredicted RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 PANX1Q96RD7 426 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 EMC6Q9BV81 110 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 MRPL37Q9BZE1 423 aaKnown RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 OR51B6Q9H340 312 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 GPR35Q9HC97 309 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 POLE3Q9NRF9 147 aa8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 MYEF2Q9P2K5 600 aaKnown RBP8.72□□□□□ -1.01
SCAMP3-205ENST00000472397 CDC14BO60729 498 aa8.71□□□□□ -1.02
SCAMP3-205ENST00000472397 SERPINI2O75830 405 aa8.71□□□□□ -1.02
SCAMP3-205ENST00000472397 DBIP07108 87 aaKnown RBP8.71□□□□□ -1.02
SCAMP3-205ENST00000472397 TACSTD2P09758 323 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms