RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PPIHO43447 177 aaKnown RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 GSTZ1O43708 216 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 MOSPD3O75425 235 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ARL6IP5O75915 188 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 F10P00742 488 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 CSN2P05814 226 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 QDPRP09417 244 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 SPARCP09486 303 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 FABP4P15090 132 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 LAG3P18627 525 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TYMPP19971 482 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 RAB4AP20338 218 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GSTM3P21266 225 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PSMA3P25788 255 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 HMGB2P26583 209 aaKnown RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 NTSP30990 170 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GPR4P46093 362 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 RGRP47804 291 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PGFP49763 221 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TAS2R41P59536 307 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 STXBP1P61764 594 aaKnown RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 NHLH2Q02577 135 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 DHCR24Q15392 516 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ZBTB6Q15916 424 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ZNF674Q2M3X9 581 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 C14orf28Q4W4Y0 310 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 LBHQ53QV2 105 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 AWAT1Q58HT5 328 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 UBE2NLQ5JXB2 153 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 AKR1C8PQ5T2L2 129 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 YOD1Q5VVQ6 348 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 NSUN5P2Q63ZY6 315 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 C11orf87Q6NUJ2 197 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GDPD4Q6W3E5 623 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 HIST2H3AQ71DI3 136 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ABHD13Q7L211 337 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 FBXO16Q8IX29 292 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 LRRC56Q8IYG6 542 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 TOP6BLQ8N6T0 577 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TMEM99Q8N816 258 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ZNF485Q8NCK3 441 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GPR32P1Q8NGA4 272 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 OR4D11Q8NGI4 311 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 OR2A12Q8NGT7 310 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 SLC38A5Q8WUX1 472 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PPP1R1CQ8WVI7 109 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 OR8D1Q8WZ84 308 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 DVL3Q92997 716 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 ZNF607Q96SK3 696 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 SELENOIQ9C0D9 397 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TMEM38AQ9H6F2 299 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 SEC61A2Q9H9S3 476 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TMEM27Q9HBJ8 222 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 MMP26Q9NRE1 261 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 MAN2C1Q9NTJ4 1040 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PARPBPQ9NWS1 579 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GDF2Q9UK05 429 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 KCND3Q9UK17 655 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 TP53TG5Q9Y2B4 290 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 GOLT1BQ9Y3E0 138 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 ZNF337Q9Y3M9 751 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 MMACHCQ9Y4U1 282 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 PRSS21Q9Y6M0 314 aa3.9□□□□□ -1.79
VPS50-210ENST00000471188 FNDC1Q4ZHG4 1894 aaPredicted RBP3.9□□□□□ -1.79
VPS50-210ENST00000471188 ANKRD36A6QL64 1941 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A0G2JMZ2 1700 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 LRRC37A2A6NM11 1700 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A0D9SEW6 157 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 C13orf42A0A1B0GVH6 325 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A1W2PPE2 198 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 A0A1W2PRQ8 180 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ANKRD20A5PA0PJZ0 165 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 C5orf51A6NDU8 294 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 MARCH11A6NNE9 402 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF705GA8MUZ8 300 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 ANKRD66B4E2M5 251 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TMEM189-UBE2V1I3L0A0 370 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RNASET2O00584 256 aaKnown RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 ATXN7O15265 892 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 PPM1DO15297 605 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 MAGEB4O15481 346 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 TGM5O43548 720 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IFNA10P01566 189 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 SERPINA5P05154 406 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 NR2F1P10589 423 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 PGAM2P15259 253 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 RAB6AP20340 208 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CRABP1P29762 137 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 HOXA6P31267 233 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GNALP38405 381 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 IFNGR2P38484 337 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CASRP41180 1078 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 CDX1P47902 265 aaPredicted RBP3.89□□□□□ -1.79
VPS50-210ENST00000471188 CSNK1DP48730 415 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 GSK3AP49840 483 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ZNF84P51523 738 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 P2RX1P51575 399 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 ATP1B3P54709 279 aa3.89□□□□□ -1.79
VPS50-210ENST00000471188 TBX4P57082 545 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms