RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 THOC6Q86W42 341 aaKnown RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 AMIGO1Q86WK6 493 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 OR2A1Q8NGT9 310 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 DOK4Q8TEW6 326 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 LCN9Q8WX39 176 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 NEIL2Q969S2 332 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PDLIM5Q96HC4 596 aaKnown RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 ZNF514Q96K75 400 aaPredicted RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 FAM71F1Q96KD3 344 aaPredicted RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 C4orf45Q96LM5 186 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PRAP1Q96NZ9 151 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 LPAR4Q99677 370 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PRRG4Q9BZD6 226 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 SRMSQ9H3Y6 488 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 KIR3DX1Q9H7L2 352 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 Q9H8V8 135 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PARVBQ9HBI1 364 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 CDH20Q9HBT6 801 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 APMAPQ9HDC9 416 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 HRASLS2Q9NWW9 162 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 NUDT4Q9NZJ9 180 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PTBP2Q9UKA9 531 aaKnown RBP3.41□□□□□ -1.86
COL9A1-206ENST00000470652 PCTPQ9UKL6 214 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 RNF150Q9ULK6 438 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
COL9A1-206ENST00000470652 NUP214P35658 2090 aaPredicted RBP3.4□□□□□ -1.86
COL9A1-206ENST00000470652 A0A0J9YVX5 310 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GOLGA8QA0A0J9YX86 632 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 IGHV5-10-1A0A0J9YXX1 117 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ATP6AP2A0A1C7CYW4 349 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 A0A1W2PR80 420 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 TRBC2A0A5B9 178 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 MEX3AA1L020 520 aaKnown RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GOLGA8OA6NCC3 632 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GOLGA6L10A6NI86 522 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 MPTX1A8MV57 137 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 HMGB1P1B2RPK0 211 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 TCP11X1B4DZS4 312 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GPR89AB7ZAQ6 455 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GOLGA8NF8WBI6 632 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 PFDN6O15212 129 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 NME6O75414 186 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ATP6AP2O75787 350 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 C1QCP02747 245 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GBAP04062 536 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 SERPIND1P05546 499 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 C8GP07360 202 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 GPR89BP0CG08 455 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ERGP11308 486 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 FOLR1P15328 257 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 VCLP18206 1134 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 XRCC1P18887 633 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 PRKACGP22612 351 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ATP5DP30049 168 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CAPZA2P47755 286 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CAPZBP47756 277 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 RAB28P51157 221 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 EFNA3P52797 238 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ATP6V0D1P61421 351 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 HERVK_113P63132 956 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CSNK2BP67870 215 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CSNK1G2P78368 415 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 HMGCS1Q01581 520 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 RPA4Q13156 261 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 DOC2AQ14183 400 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 FAM83EQ2M2I3 478 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 HKDC1Q2TB90 917 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ARMC4Q5T2S8 1044 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 LGSNQ5TDP6 509 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 HHATQ5VTY9 493 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ZBTB49Q6ZSB9 765 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 VN1R4Q7Z5H5 301 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ADCK2Q7Z695 626 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ADAMTSL2Q86TH1 951 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 NUDCD3Q8IVD9 361 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 TBC1D21Q8IYX1 336 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 LRRC34Q8IZ02 419 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 RIBC1Q8N443 379 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 CHCHD4Q8N4Q1 142 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 NUP37Q8NFH4 326 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 OR2L3Q8NG85 312 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 OR7A2PQ8NGA2 310 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 OR4F6Q8NGB9 312 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 OR2L8Q8NGY9 312 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 STAG3L4Q8TBR4 150 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ACMSDQ8TDX5 336 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 AGAP11Q8TF27 550 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF75CPQ92670 426 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF486Q96H40 463 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ZNF300Q96RE9 604 aaPredicted RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 MRPL57Q9BQC6 102 aaKnown RBP3.4□□□□□ -1.87
COL9A1-206ENST00000470652 EBF4Q9BQW3 602 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 PIGQQ9BRB3 760 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 DPH7Q9BTV6 452 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 TSSK1BQ9BXA7 367 aa3.4□□□□□ -1.87
COL9A1-206ENST00000470652 ERVK-6Q9BXR3 956 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms