RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TPSB2P20231 275 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 CASP14P31944 242 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 YWHABP31946 246 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 KCNJ3P48549 501 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GDI2P50395 445 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TPMTP51580 245 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PSMC5P62195 406 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HERV-K104P63124 156 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PAX5Q02548 391 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 BST2Q10589 180 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GANABQ14697 944 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 MEF2DQ14814 521 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PON2Q15165 354 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TPSAB1Q15661 275 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 VAMP3Q15836 100 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 UAP1Q16222 522 aaPredicted RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 CAMK4Q16566 473 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 QRICH1Q2TAL8 776 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ALKBH6Q3KRA9 238 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 THEM4Q5T1C6 240 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HHATQ5VTY9 493 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TWF2Q6IBS0 349 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 RHBDD2Q6NTF9 364 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 WASH2PQ6VEQ5 465 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 DCXRQ7Z4W1 244 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 SCD5Q86SK9 330 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ITIH5Q86UX2 942 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 CCDC50Q8IVM0 306 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 LRRC34Q8IZ02 419 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 C17orf78Q8N4C9 275 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ENKURQ8TC29 256 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 UBTD2Q8WUN7 234 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PIGCQ92535 297 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 HIST1H2ACQ93077 130 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GLYATL1Q969I3 302 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TOP1MTQ969P6 601 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ADIPOR1Q96A54 375 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 MRGPRFQ96AM1 343 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 TMEM45BQ96B21 275 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 CCDC124Q96CT7 223 aaKnown RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 RAB39BQ96DA2 213 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 VSTM2LQ96N03 204 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 NLNQ9BYT8 704 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 RAB1BQ9H0U4 201 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GANQ9H2C0 597 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GOLPH3Q9H4A6 298 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 POLD4Q9HCU8 107 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PSMC3IPQ9P2W1 217 aaPredicted RBP3.37□□□□□ -1.87
COL11A1-208ENST00000470170 P2RX2Q9UBL9 471 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 GGA2Q9UJY4 613 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PITPNC1Q9UKF7 332 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PSMD13Q9UNM6 376 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 FLVCR2Q9UPI3 526 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PPIL1Q9Y3C6 166 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 ATG4BQ9Y4P1 393 aa3.37□□□□□ -1.87
COL11A1-208ENST00000470170 PPIAL4CA0A0B4J2A2 164 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 A0A1B0GVL5 298 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 SERPINE3A8MV23 424 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 K7ERI5 159 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 HAS3O00219 553 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 ARPC1BO15143 372 aaKnown RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 OR1F1O43749 312 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 CCNB2O95067 398 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 NDUFA7O95182 113 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 GOT2P00505 430 aaKnown RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 IGHV3-9P01782 118 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 GSTA2P09210 222 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 PPIAL4GP0DN37 164 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 EIF2S2P20042 333 aaKnown RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 TCN1P20061 433 aaPredicted RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 GSTM3P21266 225 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 PCMT1P22061 227 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 IL32P24001 234 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 FCARP24071 287 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 IL2RGP31785 369 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 SLC26A2P50443 739 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 IFFO1Q0D2I5 559 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 ASAH1Q13510 395 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 PIGHQ14442 188 aaPredicted RBP3.36□□□□□ -1.87
COL11A1-208ENST00000470170 TTMPQ5BVD1 217 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 EOGTQ5NDL2 527 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 LGSNQ5TDP6 509 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 LIPKQ5VXJ0 399 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 FAM173BQ6P4H8 233 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 TMEM220Q6QAJ8 160 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 LHFPL4Q7Z7J7 247 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 CYP4Z1Q86W10 505 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 LRRC8AQ8IWT6 810 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 NELFCDQ8IXH7 590 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 PQLC3Q8N755 202 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 OR4A15Q8NGL6 344 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 UBA3Q8TBC4 463 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 ST8SIA1Q92185 356 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 AKR1E2Q96JD6 320 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 EBF4Q9BQW3 602 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 TUBGCP2Q9BSJ2 902 aa3.36□□□□□ -1.87
COL11A1-208ENST00000470170 TSSK1BQ9BXA7 367 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms