RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 TMEM43Q9BTV4 400 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 PCDHAC1Q9H158 963 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 PARPBPQ9NWS1 579 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 SH3GLB1Q9Y371 365 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 CADP27708 2225 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 ALPK2Q86TB3 2170 aa8.61□□□□□ -1.03
SRRT-208ENST00000469602 TRAPPC13A5PLN9 417 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 DEFB108AA8MXU0 73 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 SIAH2O43255 324 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 DCTN3O75935 186 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 FAM107AO95990 144 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 IGHV3-9P01782 118 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 THBDP07204 575 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 COX5AP20674 150 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 GSK3BP49841 420 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 PSME3P61289 254 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 MFSD13AQ14CX5 517 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 POU4F3Q15319 338 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 TSC22D1Q15714 1073 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 CASP12Q6UXS9 341 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 LINC00114Q6XXX2 140 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 BHLHA15Q7RTS1 189 aaPredicted RBP8.6□□□□□ -1.03
SRRT-208ENST00000469602 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
SRRT-208ENST00000469602 CARM1Q86X55 608 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 UBE2J2Q8N2K1 259 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 ANKS4BQ8N8V4 417 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 ZIC4Q8N9L1 334 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 NRGNQ92686 78 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 CCT8L2Q96SF2 557 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
SRRT-208ENST00000469602 ALG2Q9H553 416 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 SPAG4Q9NPE6 437 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 C6orf203Q9P0P8 240 aaPredicted RBP8.6□□□□□ -1.03
SRRT-208ENST00000469602 GMPR2Q9P2T1 348 aaKnown RBP8.6□□□□□ -1.03
SRRT-208ENST00000469602 ABCD2Q9UBJ2 740 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 MALT1Q9UDY8 824 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 SLC7A7Q9UM01 511 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 RASD1Q9Y272 281 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 B3GALT5Q9Y2C3 310 aa8.6□□□□□ -1.03
SRRT-208ENST00000469602 PLCE1Q9P212 2302 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 M0R082 166 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 CXCR6O00574 342 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 GSTA4O15217 222 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 LYZL6O75951 148 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 LYPD3O95274 346 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 THY1P04216 161 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 TNFRSF1BP20333 461 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 PTNP21246 168 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 IGHV1-2P23083 117 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 GRPRP30550 384 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 DNAJA1P31689 397 aaKnown RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 SELENOWP63302 87 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 GKAP1Q5VSY0 366 aaPredicted RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 WDR88Q6ZMY6 472 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 CREB3L2Q70SY1 520 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 H1FNTQ75WM6 255 aaPredicted RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 AAED1Q7RTV5 226 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 WFDC8Q8IUA0 241 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 EPHX4Q8IUS5 362 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 ADPRHL1Q8NDY3 354 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 OR6S1Q8NH40 331 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 ZNF417Q8TAU3 575 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 LZICQ8WZA0 190 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 HSD17B8Q92506 261 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 PIK3IP1Q96FE7 263 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 SLC41A3Q96GZ6 507 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 TPD52L3Q96J77 140 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 MPP4Q96JB8 637 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 ZNF385AQ96PM9 386 aaKnown RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 ZNF587Q96SQ5 575 aaPredicted RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 KCTD14Q9BQ13 255 aaPredicted RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 ZNF426Q9BUY5 554 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 POLR2J2Q9GZM3 115 aaKnown RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 POLR2J3Q9H1A7 115 aaKnown RBP8.59□□□□□ -1.03
SRRT-208ENST00000469602 PLEKHF2Q9H8W4 249 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 ASB6Q9NWX5 421 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 FAM53CQ9NYF3 392 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 SEC14L4Q9UDX3 406 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 TAGLN3Q9UI15 199 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 CORINQ9Y5Q5 1042 aa8.59□□□□□ -1.03
SRRT-208ENST00000469602 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
SRRT-208ENST00000469602 DSCAMO60469 2012 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 LOC102725191A0A1B0GVB3 256 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 A0A1W2PPR1 153 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 PDLIM1O00151 329 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 KLF4O43474 513 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 SHOX2O60902 331 aaPredicted RBP8.58□□□□□ -1.04
SRRT-208ENST00000469602 OR5F1O95221 314 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 BGLAPP02818 100 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 ZNF43P17038 809 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 GGT1P19440 569 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 CBLP22681 906 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 OR1E2P47887 323 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 NR1H2P55055 460 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 TAS2R41P59536 307 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 LTBQ06643 244 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 FAPQ12884 760 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 BEX5Q5H9J7 111 aa8.58□□□□□ -1.04
SRRT-208ENST00000469602 TTC33Q6PID6 262 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms